Factsheet for Zm00001d019957_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98656	Sorghum	peroxisome, plastid	89.1	91.35
Os07t0280200-01	Rice	peroxisome	73.29	74.73
TraesCS4A01G239000.1	Wheat	peroxisome	71.7	74.05
TraesCS4D01G074600.1	Wheat	peroxisome	71.35	73.68
TraesCS4B01G076000.1	Wheat	peroxisome	71.18	73.5
TraesCS3A01G472200.1	Wheat	peroxisome	70.83	73.27
TraesCS3B01G515400.1	Wheat	peroxisome	69.77	72.18
TraesCS3D01G468000.1	Wheat	peroxisome	69.6	71.48
HORVU4Hr1G012680.8	Barley	peroxisome	69.77	71.27
TraesCS4D01G074700.1	Wheat	peroxisome	68.37	71.25
HORVU4Hr1G012660.1	Barley	peroxisome	67.31	70.79
TraesCS4B01G076100.1	Wheat	peroxisome	66.96	70.17
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	69.42	68.1
TraesCS5B01G570100.1	Wheat	peroxisome	66.08	67.87
TraesCS5D01G561500.1	Wheat	peroxisome	65.73	67.39
TraesCS4A01G238800.1	Wheat	plastid	48.68	64.12
CDY45731	Canola	peroxisome	16.52	61.04
GSMUA_Achr1P13470_001	Banana	peroxisome	52.72	58.14
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	48.33	50.0
Zm00001d018660_P001	Maize	peroxisome	48.68	49.2
CDY71478	Canola	vacuole	39.37	48.8
CDY45730	Canola	vacuole	39.19	48.58
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.22	48.43
Solyc03g111170.2.1	Tomato	nucleus	46.22	47.64
PGSC0003DMT400039281	Potato	peroxisome	46.05	47.46
KRH63739	Soybean	peroxisome, plastid	48.33	47.41
VIT_14s0171g00290.t01	Wine grape	peroxisome	43.94	46.21
KRH54211	Soybean	peroxisome	48.33	46.06
Bra029229.1-P	Field mustard	peroxisome	45.17	45.98
Zm00001d012144_P001	Maize	plastid	33.04	45.85
AT5G63380.1	Thale cress	peroxisome	44.82	45.37
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.41	44.91
KRH57646	Soybean	peroxisome, plastid	42.53	43.84
KRG94318	Soybean	peroxisome, plastid	41.65	43.81
Zm00001d027519_P001	Maize	plasma membrane	40.42	41.74
Zm00001d033055_P001	Maize	peroxisome	37.61	38.91
Zm00001d027711_P003	Maize	extracellular	36.56	37.48
Zm00001d050224_P002	Maize	peroxisome	33.39	33.93
Zm00001d030132_P002	Maize	peroxisome	36.2	32.39
KRH57649	Soybean	plastid	15.82	32.14
KRG94321	Soybean	cytosol, golgi, peroxisome	17.75	32.06
Zm00001d003702_P001	Maize	plastid	34.27	31.97
Zm00001d032103_P001	Maize	peroxisome	30.05	30.81
Zm00001d015459_P003	Maize	peroxisome	31.11	30.15
Zm00001d046915_P001	Maize	extracellular	31.28	27.86
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	30.05	26.97
Zm00001d039274_P003	Maize	peroxisome	34.45	19.44

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	UniProt:A0A1D6I1A4	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016874	ProteinID:ONM53999.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	SUPFAM:SSF56801	UniParc:UPI000844B9AD	EnsemblPlantsGene:Zm00001d019957	EnsemblPlants:Zm00001d019957_P002	EnsemblPlants:Zm00001d019957_T002
SEG:seg	:	:	:	:	:

Description

4-coumarate--CoA ligase-like 9

Coordinates

chr7:-:80232185..80242102

Molecular Weight (calculated)

60186.6 Da

IEP (calculated)

8.281

GRAVY (calculated)

0.102

Length

569 amino acids

Sequence
(BLAST)

001: MATSAPAANA DGAAPGGVDG RSGFCEVTRT FRSLRPPVPL PPTDSPLSFP EFAFSLLASS PTPAHPALLD AATGEAVSFP AFLSQVRALA GALRSVVRLG
101: RGDVAFVLAP TRLDVPVLYF ALLSFGAVVS PVNPALTADE VARLVALSGA SVAFAVSSTA AKLPAGLPAV LLDSDHFRSF LQKQSDGRGE EGLAADTAVV
201: RQSDTAAIQY SSGTTGRVKA AALPHRSFIA MAAGSHALLG KPRRGRERSL LGAPMFHSMG FYYTLKGVAL GHTTVMLTDA VARRGVKGVI EAAGRWAVSE
301: MTASPPVVVA MVKERCHLEA LERVVCGGAP LPRTAAESFR RRFPNVDLCM GYGSTEAGGI SLMIQREECG RICSAGRVSE NVEVKIVDHV TGEALSVGQK
401: GELLVRGPAV MAAQQDVRSE LAGYVGDEEA NASSFDSEGW LRTGDLCYID QDGFLFVVDR LKELIKYKGY QVPPAELELV LQSLPEVIDA AVMPYPHEEA
501: GQIPVALVVR QPGSKVTEAQ VMDHVAQRVA PYKKIRKVLF VDSIPKSPAG KILRRQLTNH VQAGAVSRM

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.