Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 2
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plasma membrane: 23508561 mitochondrion: 27297264 plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95569 | Sorghum | peroxisome | 94.56 | 94.21 |
| Os03t0132000-01 | Rice | plasma membrane | 88.93 | 88.77 |
| HORVU4Hr1G081940.3 | Barley | peroxisome | 87.48 | 87.64 |
| TraesCS5A01G498800.1 | Wheat | peroxisome | 87.48 | 87.32 |
| TraesCS4B01G326800.1 | Wheat | peroxisome, plastid | 87.11 | 86.96 |
| TraesCS4D01G323500.1 | Wheat | plastid | 86.93 | 86.93 |
| GSMUA_Achr8P13230_001 | Banana | peroxisome | 66.79 | 73.16 |
| KRH17509 | Soybean | peroxisome, plastid | 63.88 | 64.12 |
| Solyc12g094520.1.1 | Tomato | plastid | 64.07 | 64.07 |
| PGSC0003DMT400075394 | Potato | peroxisome, plastid | 63.88 | 63.88 |
| CDY33631 | Canola | plastid | 64.07 | 63.83 |
| Bra016463.1-P | Field mustard | plastid | 63.52 | 63.29 |
| CDX96633 | Canola | plastid | 63.34 | 63.11 |
| VIT_18s0001g00290.t01 | Wine grape | peroxisome | 62.79 | 63.02 |
| AT1G20510.1 | Thale cress | plastid | 61.89 | 62.45 |
| Bra012233.1-P | Field mustard | plastid | 58.44 | 59.41 |
| CDY01369 | Canola | plastid | 58.44 | 59.3 |
| VIT_18s0001g00280.t01 | Wine grape | peroxisome, plastid | 58.62 | 58.83 |
| CDY31883 | Canola | plastid | 57.89 | 58.75 |
| CDX96636 | Canola | golgi, vacuole | 40.29 | 57.96 |
| Bra012232.1-P | Field mustard | peroxisome, plastid | 57.35 | 57.56 |
| CDY01370 | Canola | peroxisome, plastid | 57.35 | 57.45 |
| AT1G20500.1 | Thale cress | plastid | 57.35 | 57.45 |
| CDY31472 | Canola | peroxisome | 53.18 | 57.0 |
| CDY29527 | Canola | peroxisome | 54.45 | 56.6 |
| CDX96637 | Canola | plastid | 56.62 | 56.42 |
| Bra016464.1-P | Field mustard | plastid | 57.35 | 56.33 |
| CDY33628 | Canola | plastid | 55.9 | 55.8 |
| AT1G20480.1 | Thale cress | peroxisome | 57.17 | 55.75 |
| Bra025822.1-P | Field mustard | peroxisome | 54.81 | 55.62 |
| CDX96638 | Canola | peroxisome | 51.91 | 54.27 |
| Bra016465.1-P | Field mustard | plastid | 48.28 | 54.18 |
| Bra016466.1-P | Field mustard | peroxisome | 53.54 | 53.83 |
| AT5G38120.1 | Thale cress | plastid | 52.81 | 52.91 |
| CDY31474 | Canola | peroxisome | 54.27 | 51.55 |
| CDY33627 | Canola | peroxisome | 52.09 | 51.53 |
| CDY33629 | Canola | golgi, vacuole | 37.93 | 49.41 |
| AT1G20490.2 | Thale cress | peroxisome | 39.56 | 48.77 |
| Zm00001d033055_P001 | Maize | peroxisome | 43.56 | 43.64 |
| Zm00001d018660_P001 | Maize | peroxisome | 44.1 | 43.16 |
| Zm00001d027711_P003 | Maize | extracellular | 42.29 | 41.98 |
| Zm00001d019957_P002 | Maize | peroxisome | 41.74 | 40.42 |
| Zm00001d012144_P001 | Maize | plastid | 28.31 | 38.05 |
| Zm00001d050224_P002 | Maize | peroxisome | 38.66 | 38.04 |
| Zm00001d032103_P001 | Maize | peroxisome | 36.84 | 36.58 |
| Zm00001d030132_P002 | Maize | peroxisome | 42.11 | 36.48 |
| Zm00001d015459_P003 | Maize | peroxisome | 38.11 | 35.78 |
| Zm00001d003702_P001 | Maize | plastid | 37.57 | 33.93 |
| Zm00001d046915_P001 | Maize | extracellular | 37.57 | 32.39 |
| Zm00001d051529_P001 | Maize | peroxisome, plasma membrane | 34.48 | 29.97 |
| Zm00001d039274_P003 | Maize | peroxisome | 37.02 | 20.24 |
Protein Annotations
| EntrezGene:100274307 | MapMan:11.7.1.7 | Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | InterPro:AMP-bd_C | InterPro:AMP-binding_CS |
| InterPro:AMP-dep_Synth/Lig | UniProt:B4G058 | EMBL:BT042746 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016874 | ProteinID:ONL93362.1 |
| PFAM:PF00501 | PFAM:PF13193 | ScanProsite:PS00455 | PANTHER:PTHR24096 | PANTHER:PTHR24096:SF186 | SUPFAM:SSF56801 |
| TMHMM:TMhelix | UniParc:UPI00017B7A4B | EnsemblPlantsGene:Zm00001d027519 | EnsemblPlants:Zm00001d027519_P001 | EnsemblPlants:Zm00001d027519_T001 | SEG:seg |
Description
4-coumarate--CoA ligase-like 5
Coordinates
chr1:+:7339915..7346200
Molecular Weight (calculated)
59446.3 Da
IEP (calculated)
9.358
GRAVY (calculated)
0.011
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARPDARSG YCAATRTFRS KRADVPLPAD ADLDVVRFLA SRRHAGVVAL VDAATGHRVT FQELWRAVEG AATALAAPPL SLRKGQVALI LSPNSVHFPV
101: AALAAMSLGA VLTTANPLNT PAEIAKQVAD ARPVVAFTTR DLLPKLPRAG AGAGIRVVLL EPDRLPSDPS PVVATIGEIS ATPPDPTRRR DRVTQDDPAT
201: LLYSSGTTGP SKGVVATHRS LISMVQIIMS RFRLEASNRT ETFLCTVPMF HVYGLVAFAT GLLGCGATIV VLSKYELPEM LRAINEYGVT YLPLVPPILV
301: AMLAHPNRLP LGGLRKVLSG GAPLSKELIE GFKEKYPQVE ILQGYGLTES TAIGASTDSA EESSRYGTAG LLSPSTEAKI VDPETGEALP VNRTGELWIR
401: GPYVMKGYFK NAEATQSTLT PDGWLKTGDL CYIDEDGYLF VVDRLKELIK YKGYQVPPAE LEALLLTHPE IEDVAVIPFP DREVGQFPMA YVVRKKGSNL
501: SEREVMEFVA KQVAPYKKVR KVAFVAEIPK NASGKILRKD LIKLATSKSK L
101: AALAAMSLGA VLTTANPLNT PAEIAKQVAD ARPVVAFTTR DLLPKLPRAG AGAGIRVVLL EPDRLPSDPS PVVATIGEIS ATPPDPTRRR DRVTQDDPAT
201: LLYSSGTTGP SKGVVATHRS LISMVQIIMS RFRLEASNRT ETFLCTVPMF HVYGLVAFAT GLLGCGATIV VLSKYELPEM LRAINEYGVT YLPLVPPILV
301: AMLAHPNRLP LGGLRKVLSG GAPLSKELIE GFKEKYPQVE ILQGYGLTES TAIGASTDSA EESSRYGTAG LLSPSTEAKI VDPETGEALP VNRTGELWIR
401: GPYVMKGYFK NAEATQSTLT PDGWLKTGDL CYIDEDGYLF VVDRLKELIK YKGYQVPPAE LEALLLTHPE IEDVAVIPFP DREVGQFPMA YVVRKKGSNL
501: SEREVMEFVA KQVAPYKKVR KVAFVAEIPK NASGKILRKD LIKLATSKSK L
001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL
Arabidopsis Description
4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.