Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- peroxisome 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33628 | Canola | plastid | 77.27 | 76.99 |
| CDX96637 | Canola | plastid | 77.27 | 76.85 |
| Bra016465.1-P | Field mustard | plastid | 67.64 | 75.76 |
| AT1G20500.1 | Thale cress | plastid | 73.45 | 73.45 |
| AT1G20490.2 | Thale cress | peroxisome | 55.09 | 67.79 |
| AT1G20510.1 | Thale cress | plastid | 63.82 | 64.29 |
| VIT_18s0001g00290.t01 | Wine grape | peroxisome | 63.27 | 63.39 |
| KRH17509 | Soybean | peroxisome, plastid | 60.91 | 61.02 |
| VIT_18s0001g00280.t01 | Wine grape | peroxisome, plastid | 60.73 | 60.84 |
| Solyc12g094520.1.1 | Tomato | plastid | 59.64 | 59.53 |
| GSMUA_Achr8P13230_001 | Banana | peroxisome | 54.36 | 59.44 |
| PGSC0003DMT400075394 | Potato | peroxisome, plastid | 59.27 | 59.17 |
| AT1G20480.1 | Thale cress | peroxisome | 56.91 | 55.4 |
| Zm00001d027519_P001 | Maize | plasma membrane | 52.91 | 52.81 |
| EER95569 | Sorghum | peroxisome | 52.73 | 52.44 |
| HORVU4Hr1G081940.3 | Barley | peroxisome | 52.36 | 52.36 |
| TraesCS4D01G323500.1 | Wheat | plastid | 52.0 | 51.91 |
| TraesCS5A01G498800.1 | Wheat | peroxisome | 52.0 | 51.81 |
| Os03t0132000-01 | Rice | plasma membrane | 51.64 | 51.45 |
| TraesCS4B01G326800.1 | Wheat | peroxisome, plastid | 51.64 | 51.45 |
| AT5G63380.1 | Thale cress | peroxisome | 42.91 | 41.99 |
| AT4G05160.1 | Thale cress | peroxisome | 39.64 | 40.07 |
| AT4G19010.1 | Thale cress | peroxisome, plastid | 37.64 | 36.57 |
| AT1G51680.1 | Thale cress | peroxisome | 35.64 | 34.94 |
| AT3G21230.1 | Thale cress | peroxisome | 34.55 | 33.33 |
| AT1G62940.1 | Thale cress | peroxisome | 32.55 | 33.03 |
| AT3G21240.1 | Thale cress | peroxisome | 33.09 | 32.73 |
| AT1G65060.1 | Thale cress | peroxisome | 33.09 | 32.44 |
Protein Annotations
| MapMan:11.7.1.7 | Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | Symbol:4CL8 | EntrezGene:833792 | ProteinID:AED94270.1 |
| EMBL:AK118041 | InterPro:AMP-bd_C | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT5G38120 | EnsemblPlantsGene:AT5G38120 |
| RefSeq:AT5G38120 | TAIR:AT5G38120 | RefSeq:AT5G38120-TAIR-G | EnsemblPlants:AT5G38120.1 | TAIR:AT5G38120.1 | EMBL:AY250832 |
| EMBL:AY376735 | Unigene:At.30435 | ProteinID:BAB11279.1 | EMBL:BT005689 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016874 | RefSeq:NP_198628.2 | PFAM:PF00501 | PFAM:PF13193 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00455 | PANTHER:PTHR24096 | PANTHER:PTHR24096:SF186 | UniProt:Q84P26 | SUPFAM:SSF56801 |
| TMHMM:TMhelix | UniParc:UPI000000C6FC | : | : | : | : |
Description
4CLL84-coumarate--CoA ligase-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q84P26]
Coordinates
chr5:+:15213593..15216205
Molecular Weight (calculated)
60396.4 Da
IEP (calculated)
8.930
GRAVY (calculated)
-0.019
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSQRSSSL IDPRNGFCTS NSTFYSKRKP LALPSKESLD ITTFISSQTY RGKTAFIDAA TDHRISFSDL WMAVDRVADC LLHDVGIRRG DVVLVLSPNT
101: ISIPIVCLSV MSLGAVLTTA NPLNTASEIL RQIADSNPKL AFTTPELAPK IASSGISIVL ERVEDTLRVP RGLKVVGNLT EMMKKEPSGQ AVRNQVHKDD
201: TAMLLYSSGT TGRSKGVNSS HGNLIAHVAR YIAEPFEQPQ QTFICTVPLF HTFGLLNFVL ATLALGTTVV ILPRFDLGEM MAAVEKYRAT TLILVPPVLV
301: TMINKADQIM KKYDVSFLRT VRCGGAPLSK EVTQGFMKKY PTVDVYQGYA LTESNGAGAS IESVEESRRY GAVGLLSCGV EARIVDPNTG QVMGLNQTGE
401: LWLKGPSIAK GYFRNEEEII TSEGWLKTGD LCYIDNDGFL FIVDRLKELI KYKGYQVPPA ELEALLLNHP DILDAAVIPF PDKEAGQFPM AYVARKPESN
501: LCEKKVIDFI SKQVAPYKKI RKVAFIDSIP KTPSGKTLRK DLIKFAISKI
101: ISIPIVCLSV MSLGAVLTTA NPLNTASEIL RQIADSNPKL AFTTPELAPK IASSGISIVL ERVEDTLRVP RGLKVVGNLT EMMKKEPSGQ AVRNQVHKDD
201: TAMLLYSSGT TGRSKGVNSS HGNLIAHVAR YIAEPFEQPQ QTFICTVPLF HTFGLLNFVL ATLALGTTVV ILPRFDLGEM MAAVEKYRAT TLILVPPVLV
301: TMINKADQIM KKYDVSFLRT VRCGGAPLSK EVTQGFMKKY PTVDVYQGYA LTESNGAGAS IESVEESRRY GAVGLLSCGV EARIVDPNTG QVMGLNQTGE
401: LWLKGPSIAK GYFRNEEEII TSEGWLKTGD LCYIDNDGFL FIVDRLKELI KYKGYQVPPA ELEALLLNHP DILDAAVIPF PDKEAGQFPM AYVARKPESN
501: LCEKKVIDFI SKQVAPYKKI RKVAFIDSIP KTPSGKTLRK DLIKFAISKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.