CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01369	Canola	plastid	97.24	97.24
CDY01370	Canola	peroxisome, plastid	81.95	80.91
CDX96637	Canola	plastid	79.01	77.58
CDY33628	Canola	plastid	78.45	77.17
AT1G20490.2	Thale cress	peroxisome	60.22	73.15
CDY31474	Canola	peroxisome	75.87	71.03
CDX96636	Canola	golgi, vacuole	49.17	69.71
CDX96633	Canola	plastid	67.77	66.55
CDY33631	Canola	plastid	67.59	66.37
VIT_18s0001g00290.t01	Wine grape	peroxisome	65.19	64.48
CDY33629	Canola	golgi, vacuole	49.54	63.59
KRH17509	Soybean	peroxisome, plastid	64.27	63.57
CDY45731	Canola	peroxisome	17.86	62.99
GSMUA_Achr8P13230_001	Banana	peroxisome	58.01	62.62
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	62.25	61.57
CDY31472	Canola	peroxisome	58.2	61.48
Solyc12g094520.1.1	Tomato	plastid	62.06	61.16
PGSC0003DMT400075394	Potato	peroxisome, plastid	61.69	60.8
CDY29527	Canola	peroxisome	58.38	59.81
CDX96638	Canola	peroxisome	58.01	59.77
Zm00001d027519_P001	Maize	plasma membrane	58.75	57.89
EER95569	Sorghum	peroxisome	58.38	57.32
TraesCS4D01G323500.1	Wheat	plastid	58.01	57.17
HORVU4Hr1G081940.3	Barley	peroxisome	57.83	57.09
TraesCS5A01G498800.1	Wheat	peroxisome	58.01	57.07
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	57.46	56.52
Os03t0132000-01	Rice	plasma membrane	56.91	55.98
CDY33627	Canola	peroxisome	57.09	55.66
CDY45730	Canola	vacuole	42.36	50.11
CDY71478	Canola	vacuole	41.8	49.46
CDY53918	Canola	peroxisome	16.21	47.06
CDY32418	Canola	peroxisome	14.73	43.72
CDY46375	Canola	peroxisome	41.99	42.07
CDY39155	Canola	peroxisome	41.8	41.88
CDY39153	Canola	peroxisome	40.15	40.45
CDY46376	Canola	peroxisome	39.96	40.26
CDX78914	Canola	peroxisome, plastid	41.07	38.85
CDY68920	Canola	peroxisome	37.02	36.35
CDY06431	Canola	peroxisome	36.28	35.62
CDY19568	Canola	peroxisome	36.1	35.51
CDX87831	Canola	peroxisome	35.91	35.39
CDY43921	Canola	peroxisome	35.73	35.21
CDY48875	Canola	mitochondrion, plastid, vacuole	28.73	35.14
CDX82208	Canola	peroxisome	36.46	34.62
CDY39816	Canola	peroxisome	34.07	34.26
CDY32416	Canola	peroxisome	36.1	34.15
CDY19570	Canola	peroxisome	34.62	33.63
CDY07442	Canola	peroxisome	33.89	33.09
CDY39293	Canola	peroxisome	33.52	32.67
CDX99401	Canola	peroxisome	37.57	30.54
CDY71190	Canola	peroxisome	19.34	28.38
CDY06435	Canola	vacuole	23.02	28.09
CDY65966	Canola	peroxisome	16.57	25.5
CDY03253	Canola	peroxisome	34.25	12.05
CDX78913	Canola	cytosol	0.18	0.56

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:A0A078H4V0	UniProt:A0A078H4V0	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY31883	ProteinID:CDY31883	ProteinID:CDY31883.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00050624001	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF186
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0004EDECA1	SEG:seg	:	:

Description

BnaC07g15330DBnaC07g15330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4V0]

Coordinates

chrLK032281:+:326612..329034

Molecular Weight (calculated)

58819.0 Da

IEP (calculated)

8.109

GRAVY (calculated)

0.013

Length

543 amino acids

Sequence
(BLAST)

001: MASLIDSRSG FCKSNSTFYS KRNPLPLPAN PSLDVTTFIS SQTHRGTTAF IDAATGLRLS FSELWTAVER VADCLHHDIG LRRGHVVLIL SPNSIYIPVV
101: SLAVMSLGAV VTTANTLNTA GEISRQTADS NPTLAFTTAD LAPKLAGSGI SVVLERVGST RGVNVVGAVS EMMEKEPSGQ RVRDRVNEED TAMMLYSSGT
201: TGPSKGVITS HRNLTASVAR FVSEKRIGGQ VFLCTVPMFH TYGLLCFTMF TVAVGSTVVI LRRFDLHGMM AAVEKYSATI LALAPPVVVA MTNEADVIRA
301: KYDLSSLRTV RCGGAPLSKE VTEGFMEKYP TVDILAGYAL TESNGAGASI DTVEESRRYG SVGLLAPGVE ARIVDPDTGR VMGVNQTGEL WLRGPSISKG
401: YFKNGEATNE TINLEGWLRT GDICYIDEDG FLFVVDRLKE LIKYKGYQVP PAELEALLVT HPDILDAAVI PFPDKEAGQY PMAYVTRKLE SDLSEKQIID
501: FVSKQQVAPY KKIRKVAFIN SIPKNPSGKT LRKDLIKLAT SKI

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.