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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71190 Canola peroxisome 69.97 66.76
Bra001820.1-P Field mustard peroxisome 89.8 54.19
CDX82208 Canola peroxisome 80.17 49.48
CDY32416 Canola peroxisome 79.32 48.78
CDY68920 Canola peroxisome 74.22 47.38
CDY06431 Canola peroxisome 74.22 47.38
CDY48875 Canola mitochondrion, plastid, vacuole 59.21 47.07
CDY19570 Canola peroxisome 72.8 45.98
CDX87831 Canola peroxisome 54.11 34.66
CDY43921 Canola peroxisome 53.26 34.12
CDY19568 Canola peroxisome 52.69 33.7
GSMUA_AchrUn_... Banana peroxisome 43.63 29.73
KRH02886 Soybean peroxisome, plastid 47.31 29.61
TraesCS2A01G145800.1 Wheat peroxisome 45.04 29.34
GSMUA_Achr4P05820_001 Banana peroxisome 43.34 29.31
TraesCS2B01G171200.1 Wheat peroxisome 44.76 29.26
TraesCS2D01G150400.1 Wheat peroxisome 44.76 29.26
Os08t0448000-01 Rice peroxisome 44.48 29.13
GSMUA_Achr4P12590_001 Banana peroxisome 40.23 29.04
GSMUA_Achr1P23450_001 Banana peroxisome 42.78 29.04
EES15085 Sorghum peroxisome 45.04 28.8
Zm00001d032103_P001 Maize peroxisome 45.04 28.65
KRH19011 Soybean peroxisome 45.61 28.65
GSMUA_Achr7P05070_001 Banana peroxisome 39.38 28.19
TraesCS7A01G496200.1 Wheat peroxisome 43.34 27.47
Os06t0656500-01 Rice peroxisome 43.34 27.37
TraesCS7D01G483400.1 Wheat peroxisome 43.34 27.32
Os08t0245200-01 Rice extracellular 43.63 27.3
Os02t0177600-01 Rice plasma membrane 42.78 27.26
HORVU6Hr1G030390.2 Barley peroxisome 42.21 26.94
EER90150 Sorghum peroxisome 42.49 26.93
TraesCS6B01G179900.2 Wheat peroxisome 41.64 26.82
CDY07442 Canola peroxisome 42.21 26.8
EES13602 Sorghum peroxisome 43.34 26.8
TraesCS6A01G151700.1 Wheat peroxisome 41.36 26.74
EES04623 Sorghum peroxisome 41.93 26.67
TraesCS6D01G141700.1 Wheat peroxisome 41.36 26.59
CDY39293 Canola peroxisome 41.93 26.57
HORVU7Hr1G111130.3 Barley peroxisome, plastid 43.63 26.1
Zm00001d050224_P002 Maize peroxisome 41.36 26.07
Zm00001d015459_P003 Maize peroxisome 41.93 25.21
GSMUA_Achr9P22840_001 Banana peroxisome 26.35 24.35
Zm00001d046915_P001 Maize extracellular 42.78 23.63
CDY46375 Canola peroxisome 30.59 19.93
CDY39155 Canola peroxisome 30.03 19.56
CDY39153 Canola peroxisome 28.9 18.92
CDY46376 Canola peroxisome 28.61 18.74
CDX96638 Canola peroxisome 25.21 16.89
CDY01370 Canola peroxisome, plastid 26.06 16.73
CDY31883 Canola plastid 25.5 16.57
CDY45730 Canola vacuole 21.53 16.56
CDX96633 Canola plastid 25.78 16.46
CDY33631 Canola plastid 25.78 16.46
CDY33628 Canola plastid 25.21 16.12
CDY71478 Canola vacuole 20.96 16.12
CDY39816 Canola peroxisome 24.65 16.11
CDX78914 Canola peroxisome, plastid 26.06 16.03
CDY01369 Canola plastid 24.65 16.02
CDX96637 Canola plastid 24.93 15.91
CDY31472 Canola peroxisome 22.95 15.76
CDY33627 Canola peroxisome 24.65 15.62
CDY29527 Canola peroxisome 23.23 15.47
CDY31474 Canola peroxisome 24.93 15.17
CDY06435 Canola vacuole 17.85 14.16
CDY33629 Canola golgi, vacuole 16.43 13.71
CDX96636 Canola golgi, vacuole 14.16 13.05
CDX99401 Canola peroxisome 22.38 11.83
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 15.58 10.07
CDY32418 Canola peroxisome 4.53 8.74
CDY03253 Canola peroxisome 24.93 5.7
CDY53918 Canola peroxisome 2.55 4.81
CDY45731 Canola peroxisome 1.7 3.9
CDX78913 Canola cytosol 0.28 0.56
Protein Annotations
EnsemblPlants:CDY65966EnsemblPlantsGene:GSBRNA2T00051089001Gene3D:3.40.50.12780GO:A0A078JJI2GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigPANTHER:PTHR24096PANTHER:PTHR24096:SF207
PFAM:PF00501ProteinID:CDY65966ProteinID:CDY65966.1ScanProsite:PS00455SEG:segSUPFAM:SSF56801
UniParc:UPI0004EE2B23UniProt:A0A078JJI2MapMan:35.1:::
Description
BnaC03g74270DBnaC03g74270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJI2]
Coordinates
chrLK035023:-:4193..5341
Molecular Weight (calculated)
39187.6 Da
IEP (calculated)
6.751
GRAVY (calculated)
0.132
Length
353 amino acids
Sequence
(BLAST)
001: MLSRQQDTLF LTKKLDQEPC QDIIFRSKLA DIVIPNHLPL TDYVFQRFSG NGEGDSTATC LIDSATGRIF TYANVQINSQ RVAVGIHRLG IRQRDTVMLL
101: LPNSPEFAFS FLAVAYLGAQ CYVDKLINLQ NDGVLIVCVD DENGTVSLAD GCVSFAELTQ ADETELSKPE ISPDDTVAIP YSSGTTGLPK GVMITHKGLV
201: TSIAQKVDGE NPNLNFTRDD VIICFLPMFN TYAFNALILS AMRTGAAILI VPRFELNLVM ELIQRYKVTV VPVAPSVVLA FVKSQETERY DLSSVRMMIS
301: GAATLRKELE EAVLPKFPNA IFGQVRLGYF LYKLSSSLSR KFSYFLYKLK CKK
Best Arabidopsis Sequence Match ( AT1G51680.2 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.