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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32418 Canola peroxisome 74.33 75.96
CDY45731 Canola peroxisome 37.97 46.1
CDY48875 Canola mitochondrion, plastid, vacuole 89.3 37.61
GSMUA_Achr9P22840_001 Banana peroxisome 66.84 32.72
CDY19570 Canola peroxisome 96.26 32.2
CDY06435 Canola vacuole 69.52 29.21
GSMUA_Achr4P12590_001 Banana peroxisome 71.66 27.4
CDX82208 Canola peroxisome 82.89 27.1
CDY32416 Canola peroxisome 82.89 27.0
CDY06431 Canola peroxisome 79.14 26.76
CDY68920 Canola peroxisome 78.07 26.4
GSMUA_Achr7P05070_001 Banana peroxisome 69.52 26.37
CDY19568 Canola peroxisome 75.4 25.54
GSMUA_Achr1P23450_001 Banana peroxisome 70.59 25.38
GSMUA_Achr4P05820_001 Banana peroxisome 70.59 25.29
GSMUA_AchrUn_... Banana peroxisome 69.52 25.1
CDY43921 Canola peroxisome 73.8 25.05
CDX87831 Canola peroxisome 73.8 25.05
KRH02886 Soybean peroxisome, plastid 73.26 24.29
TraesCS6A01G151700.1 Wheat peroxisome 70.59 24.18
TraesCS6B01G179900.2 Wheat peroxisome 70.59 24.09
TraesCS6D01G141700.1 Wheat peroxisome 70.59 24.04
Os02t0177600-01 Rice plasma membrane 70.59 23.83
EER90150 Sorghum peroxisome 70.59 23.7
HORVU6Hr1G030390.2 Barley peroxisome 70.05 23.69
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 68.98 23.63
Os08t0448000-01 Rice peroxisome 67.91 23.56
TraesCS2B01G171200.1 Wheat peroxisome 67.91 23.52
TraesCS2D01G150400.1 Wheat peroxisome 67.91 23.52
EES15085 Sorghum peroxisome 68.45 23.19
EES04623 Sorghum peroxisome 68.45 23.06
TraesCS2A01G145800.1 Wheat peroxisome 66.31 22.88
Zm00001d032103_P001 Maize peroxisome 67.38 22.7
Os06t0656500-01 Rice peroxisome 67.38 22.54
TraesCS7D01G483400.1 Wheat peroxisome 67.38 22.5
TraesCS7A01G496200.1 Wheat peroxisome 66.84 22.44
Zm00001d015459_P003 Maize peroxisome 68.45 21.81
Zm00001d050224_P002 Maize peroxisome 64.17 21.43
HORVU7Hr1G111130.3 Barley peroxisome, plastid 67.38 21.36
Os08t0245200-01 Rice extracellular 63.64 21.1
CDY07442 Canola peroxisome 62.57 21.04
CDY39293 Canola peroxisome 62.03 20.83
Zm00001d046915_P001 Maize extracellular 70.59 20.66
CDX96636 Canola golgi, vacuole 42.25 20.63
EES13602 Sorghum peroxisome 62.57 20.49
KRH19011 Soybean peroxisome 58.82 19.57
CDY71478 Canola vacuole 46.52 18.95
CDY45730 Canola vacuole 45.99 18.74
CDY39816 Canola peroxisome 50.27 17.41
CDX96638 Canola peroxisome 48.66 17.27
CDY46375 Canola peroxisome 49.73 17.16
CDY39155 Canola peroxisome 49.73 17.16
CDY31472 Canola peroxisome 46.52 16.93
CDY29527 Canola peroxisome 47.59 16.79
CDY46376 Canola peroxisome 48.13 16.7
CDY33631 Canola plastid 49.2 16.64
CDX96633 Canola plastid 49.2 16.64
CDY39153 Canola peroxisome 47.06 16.33
CDY31883 Canola plastid 47.06 16.21
CDY01370 Canola peroxisome, plastid 47.06 16.0
CDY01369 Canola plastid 45.99 15.84
CDY33628 Canola plastid 45.99 15.58
CDX96637 Canola plastid 45.99 15.55
CDX78914 Canola peroxisome, plastid 47.59 15.51
CDY33629 Canola golgi, vacuole 34.76 15.37
CDY31474 Canola peroxisome 47.59 15.34
CDY33627 Canola peroxisome 44.38 14.9
CDX99401 Canola peroxisome 45.99 12.87
CDY03253 Canola peroxisome 49.73 6.03
CDY65966 Canola peroxisome 4.81 2.55
CDY71190 Canola peroxisome 3.74 1.89
CDX78913 Canola cytosol 0.53 0.56
Protein Annotations
EnsemblPlants:CDY53918EnsemblPlantsGene:GSBRNA2T00011689001Gene3D:3.30.300.30Gene3D:3.40.50.12780GO:A0A078IY23GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152InterPro:AMP-bd_CInterPro:AMP-dep_Synth/LigPANTHER:PTHR24096
PANTHER:PTHR24096:SF207PFAM:PF00501PFAM:PF13193ProteinID:CDY53918ProteinID:CDY53918.1SEG:seg
SUPFAM:SSF56801UniParc:UPI0004EEAD72UniProt:A0A078IY23MapMan:35.1::
Description
BnaCnng25720DBnaCnng25720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY23]
Coordinates
chrLK033250:+:3681..7986
Molecular Weight (calculated)
20823.3 Da
IEP (calculated)
5.342
GRAVY (calculated)
-0.154
Length
187 amino acids
Sequence
(BLAST)
001: METKIPVRNA EMKVVDTITG VSLPHNKPGE ICIRGDQLMK GYLNDPQATA QTIDKDGWLH TGDIGFVDDD DEIFIVDRLK ELIKFKGYQV APAELEALLI
101: SHPFIEDVAV VAMKDEIAGE VPVVFVVRSE GSQLTEDDVT SCINKQVVHY KRIKMVFFTD SIPKAPSGKI LRKDLRARLA NGLMNKS
Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.