Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53918 | Canola | peroxisome | 29.21 | 69.52 |
| CDY32418 | Canola | peroxisome | 26.74 | 65.03 |
| GSMUA_Achr9P22840_001 | Banana | peroxisome | 47.64 | 55.5 |
| Bra031266.1-P | Field mustard | peroxisome | 64.04 | 51.63 |
| CDY19568 | Canola | peroxisome | 64.04 | 51.63 |
| AT3G21240.1 | Thale cress | peroxisome | 59.33 | 47.48 |
| CDY45731 | Canola | peroxisome | 16.18 | 46.75 |
| CDY48875 | Canola | mitochondrion, plastid, vacuole | 44.94 | 45.05 |
| CDY43921 | Canola | peroxisome | 55.06 | 44.46 |
| CDX87831 | Canola | peroxisome | 54.83 | 44.28 |
| GSMUA_Achr7P05070_001 | Banana | peroxisome | 47.64 | 43.0 |
| GSMUA_Achr4P12590_001 | Banana | peroxisome | 46.07 | 41.92 |
| GSMUA_Achr4P05820_001 | Banana | peroxisome | 48.99 | 41.76 |
| GSMUA_Achr1P23450_001 | Banana | peroxisome | 48.31 | 41.35 |
| GSMUA_AchrUn_... | Banana | peroxisome | 47.87 | 41.12 |
| PGSC0003DMT400036886 | Potato | peroxisome | 49.21 | 40.18 |
| Solyc03g117870.2.1 | Tomato | plastid | 48.99 | 40.0 |
| PGSC0003DMT400074444 | Potato | peroxisome | 48.54 | 39.78 |
| Solyc06g068650.2.1 | Tomato | peroxisome | 48.31 | 39.59 |
| KRH09616 | Soybean | mitochondrion, peroxisome | 47.64 | 39.41 |
| KRH23700 | Soybean | peroxisome | 48.31 | 39.31 |
| EER90150 | Sorghum | peroxisome | 47.19 | 37.7 |
| Os02t0177600-01 | Rice | plasma membrane | 46.74 | 37.55 |
| Solyc12g042460.1.1 | Tomato | peroxisome | 46.07 | 37.41 |
| Os08t0448000-01 | Rice | peroxisome | 45.17 | 37.29 |
| PGSC0003DMT400037485 | Potato | peroxisome | 45.84 | 37.23 |
| TraesCS6B01G179900.2 | Wheat | peroxisome | 45.84 | 37.23 |
| TraesCS6A01G151700.1 | Wheat | peroxisome | 45.62 | 37.18 |
| TraesCS6D01G141700.1 | Wheat | peroxisome | 45.62 | 36.98 |
| HORVU6Hr1G030390.2 | Barley | peroxisome | 45.84 | 36.89 |
| TraesCS2B01G171200.1 | Wheat | peroxisome | 44.72 | 36.85 |
| TraesCS2D01G150400.1 | Wheat | peroxisome | 44.72 | 36.85 |
| TraesCS2A01G145800.1 | Wheat | peroxisome | 44.49 | 36.53 |
| Os06t0656500-01 | Rice | peroxisome | 45.62 | 36.31 |
| TraesCS7A01G496200.1 | Wheat | peroxisome | 45.17 | 36.09 |
| TraesCS7D01G483400.1 | Wheat | peroxisome | 45.39 | 36.07 |
| CDX82208 | Canola | peroxisome | 46.29 | 36.01 |
| CDY32416 | Canola | peroxisome | 46.07 | 35.71 |
| EES15085 | Sorghum | peroxisome | 44.27 | 35.69 |
| EES04623 | Sorghum | peroxisome | 44.49 | 35.68 |
| CDY68920 | Canola | peroxisome | 44.04 | 35.44 |
| CDY19570 | Canola | peroxisome | 44.49 | 35.42 |
| Zm00001d032103_P001 | Maize | peroxisome | 44.04 | 35.32 |
| CDY06431 | Canola | peroxisome | 43.82 | 35.26 |
| HORVU0Hr1G002720.3 | Barley | mitochondrion, plastid | 42.47 | 34.62 |
| Os08t0245200-01 | Rice | extracellular | 43.6 | 34.4 |
| Zm00001d015459_P003 | Maize | peroxisome | 45.17 | 34.24 |
| HORVU7Hr1G111130.3 | Barley | peroxisome, plastid | 45.39 | 34.24 |
| Zm00001d050224_P002 | Maize | peroxisome | 42.92 | 34.11 |
| CDY07442 | Canola | peroxisome | 42.02 | 33.63 |
| CDY39293 | Canola | peroxisome | 41.8 | 33.39 |
| EES13602 | Sorghum | peroxisome | 42.7 | 33.27 |
| Zm00001d046915_P001 | Maize | extracellular | 47.19 | 32.86 |
| CDY45730 | Canola | vacuole | 28.99 | 28.1 |
| CDY71478 | Canola | vacuole | 28.54 | 27.67 |
| CDY39155 | Canola | peroxisome | 30.79 | 25.28 |
| CDY46375 | Canola | peroxisome | 30.56 | 25.09 |
| CDY29527 | Canola | peroxisome | 29.44 | 24.72 |
| CDY31472 | Canola | peroxisome | 28.31 | 24.51 |
| CDY46376 | Canola | peroxisome | 29.66 | 24.49 |
| CDY39153 | Canola | peroxisome | 28.99 | 23.93 |
| CDX96638 | Canola | peroxisome | 28.31 | 23.91 |
| CDY01369 | Canola | plastid | 28.31 | 23.2 |
| CDX96633 | Canola | plastid | 28.76 | 23.15 |
| CDY31883 | Canola | plastid | 28.09 | 23.02 |
| CDY33631 | Canola | plastid | 28.54 | 22.97 |
| CDY39816 | Canola | peroxisome | 27.87 | 22.96 |
| CDY33627 | Canola | peroxisome | 27.64 | 22.08 |
| CDY01370 | Canola | peroxisome, plastid | 27.19 | 22.0 |
| CDX96636 | Canola | golgi, vacuole | 18.65 | 21.67 |
| CDY33628 | Canola | plastid | 26.74 | 21.56 |
| CDX96637 | Canola | plastid | 26.74 | 21.52 |
| CDX78914 | Canola | peroxisome, plastid | 27.42 | 21.25 |
| CDY31474 | Canola | peroxisome | 26.97 | 20.69 |
| CDY33629 | Canola | golgi, vacuole | 19.33 | 20.33 |
| CDX99401 | Canola | peroxisome | 27.64 | 18.41 |
| CDY65966 | Canola | peroxisome | 14.16 | 17.85 |
| CDY71190 | Canola | peroxisome | 11.91 | 14.32 |
| CDY03253 | Canola | peroxisome | 27.64 | 7.97 |
| CDX78913 | Canola | cytosol | 1.12 | 2.79 |
Protein Annotations
| EnsemblPlants:CDY06435 | EnsemblPlantsGene:GSBRNA2T00122456001 | Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | GO:A0A078EWJ6 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | InterPro:AMP-bd_C | InterPro:AMP-dep_Synth/Lig | PANTHER:PTHR24096 |
| PANTHER:PTHR24096:SF207 | PFAM:PF00501 | PFAM:PF13193 | ProteinID:CDY06435 | ProteinID:CDY06435.1 | SUPFAM:SSF56801 |
| UniParc:UPI0004EB08ED | MapMan:35.1 | : | : | : | : |
Description
BnaC05g30950D
Coordinates
chrLK031969:-:964384..968810
Molecular Weight (calculated)
49761.1 Da
IEP (calculated)
9.086
GRAVY (calculated)
-0.382
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCSLRVGAT ILIMPKFEIT LLLEQIQRCK VTVAMVVPPI VLAMVKSSET EKYDLTSVRM IKSGAAPLGK ELEDTISAKF PNARLGQGYG MTEAGPVLAM
101: SLGFAKEPFP VKSGACGTVV RNAELKIADP DTGSSLPRNS PGEICIRGHQ IMKGYLNDPV ATAATIDKEG WLHTGDIGFV DDDDELFIVD RLKELIKYKG
201: FQVAPAELES LLISHSDIND VAVVAMKEDD AGEVPVAFVV RSKESNLSED EIKQFVSKQV VFYKRINKVF FTDSVPKAPS GKILGETTCR ESFHLITTFE
301: KQHRITEPTV YRNPLYHTGM TPEPRTSTVF IELEDHRTLP GNLTPTTEEH LQRLYRRFWG FRQLQRTRRS FGERPGELGR EPATPPRLHH HIPPLDSFTK
401: ESAKPPESKP ATQRQRDSRI PESIFVNRKG KTKTKPPRLS VSQRV
101: SLGFAKEPFP VKSGACGTVV RNAELKIADP DTGSSLPRNS PGEICIRGHQ IMKGYLNDPV ATAATIDKEG WLHTGDIGFV DDDDELFIVD RLKELIKYKG
201: FQVAPAELES LLISHSDIND VAVVAMKEDD AGEVPVAFVV RSKESNLSED EIKQFVSKQV VFYKRINKVF FTDSVPKAPS GKILGETTCR ESFHLITTFE
301: KQHRITEPTV YRNPLYHTGM TPEPRTSTVF IELEDHRTLP GNLTPTTEEH LQRLYRRFWG FRQLQRTRRS FGERPGELGR EPATPPRLHH HIPPLDSFTK
401: ESAKPPESKP ATQRQRDSRI PESIFVNRKG KTKTKPPRLS VSQRV
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.