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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, vacuole

Predictor Summary:
  • cytosol 1
  • plastid 2
  • mitochondrion 2
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid, vacuole
Any Predictor:cytosol, mitochondrion, vacuole
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53918 Canola peroxisome 37.61 89.3
CDY32418 Canola peroxisome 36.71 89.07
Bra001820.1-P Field mustard peroxisome 94.37 71.62
CDY19570 Canola peroxisome 80.86 64.22
CDX82208 Canola peroxisome 81.98 63.64
CDY32416 Canola peroxisome 81.76 63.24
CDY06431 Canola peroxisome 77.25 62.03
CDY68920 Canola peroxisome 76.58 61.48
CDY65966 Canola peroxisome 47.07 59.21
GSMUA_Achr9P22840_001 Banana peroxisome 47.97 55.76
CDX87831 Canola peroxisome 65.32 52.63
CDY43921 Canola peroxisome 64.86 52.27
GSMUA_Achr4P12590_001 Banana peroxisome 56.98 51.74
GSMUA_Achr7P05070_001 Banana peroxisome 57.43 51.72
CDY19568 Canola peroxisome 64.19 51.63
GSMUA_Achr4P05820_001 Banana peroxisome 58.33 49.62
CDY45731 Canola peroxisome 17.12 49.35
GSMUA_Achr1P23450_001 Banana peroxisome 57.21 48.85
GSMUA_AchrUn_... Banana peroxisome 55.86 47.88
KRH02886 Soybean peroxisome, plastid 60.81 47.87
CDY71190 Canola peroxisome 39.41 47.3
TraesCS2B01G171200.1 Wheat peroxisome 55.86 45.93
EES15085 Sorghum peroxisome 56.98 45.83
TraesCS2D01G150400.1 Wheat peroxisome 55.63 45.74
Os08t0448000-01 Rice peroxisome 55.41 45.64
TraesCS6B01G179900.2 Wheat peroxisome 56.31 45.62
TraesCS6A01G151700.1 Wheat peroxisome 56.08 45.6
TraesCS6D01G141700.1 Wheat peroxisome 56.08 45.36
Os02t0177600-01 Rice plasma membrane 56.53 45.31
HORVU6Hr1G030390.2 Barley peroxisome 56.31 45.21
TraesCS2A01G145800.1 Wheat peroxisome 55.18 45.2
EER90150 Sorghum peroxisome 56.53 45.06
Zm00001d032103_P001 Maize peroxisome 56.31 45.05
CDY06435 Canola vacuole 45.05 44.94
EES04623 Sorghum peroxisome 55.63 44.5
Os06t0656500-01 Rice peroxisome 55.86 44.36
TraesCS7A01G496200.1 Wheat peroxisome 54.73 43.63
TraesCS7D01G483400.1 Wheat peroxisome 54.73 43.39
KRH19011 Soybean peroxisome 54.73 43.24
Zm00001d050224_P002 Maize peroxisome 54.28 43.04
Os08t0245200-01 Rice extracellular 54.28 42.73
CDY07442 Canola peroxisome 53.38 42.63
Zm00001d015459_P003 Maize peroxisome 56.08 42.42
EES13602 Sorghum peroxisome 54.5 42.38
CDY39293 Canola peroxisome 52.93 42.19
HORVU7Hr1G111130.3 Barley peroxisome, plastid 54.95 41.36
Zm00001d046915_P001 Maize extracellular 57.21 39.75
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 43.47 35.35
CDY71478 Canola vacuole 36.26 35.08
CDY45730 Canola vacuole 36.04 34.86
CDY46375 Canola peroxisome 38.74 31.73
CDY39155 Canola peroxisome 38.29 31.37
CDX96636 Canola golgi, vacuole 26.35 30.55
CDY46376 Canola peroxisome 36.94 30.43
CDY39153 Canola peroxisome 36.26 29.87
CDX96633 Canola plastid 36.94 29.66
CDX96638 Canola peroxisome 35.14 29.6
CDY33631 Canola plastid 36.71 29.48
CDY39816 Canola peroxisome 35.81 29.44
CDY01370 Canola peroxisome, plastid 36.26 29.27
CDY31472 Canola peroxisome 33.56 28.99
CDY31883 Canola plastid 35.14 28.73
CDY29527 Canola peroxisome 34.23 28.68
CDY01369 Canola plastid 34.68 28.36
CDX78914 Canola peroxisome, plastid 36.26 28.05
CDY33628 Canola plastid 34.68 27.9
CDY33629 Canola golgi, vacuole 26.58 27.9
CDX96637 Canola plastid 34.68 27.85
CDY31474 Canola peroxisome 35.36 27.07
CDY33627 Canola peroxisome 32.88 26.21
CDX99401 Canola peroxisome 34.91 23.2
CDY03253 Canola peroxisome 35.59 10.24
CDX78913 Canola cytosol 0.45 1.12
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3GO:A0A078IDA5UniProt:A0A078IDA5
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY48875ProteinID:CDY48875ProteinID:CDY48875.1
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00091935001
PFAM:PF00501PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF207SUPFAM:SSF56801
UniParc:UPI0004EE1C66SEG:seg::::
Description
BnaA03g36140DBnaA03g36140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDA5]
Coordinates
chrLK032799:-:317..2932
Molecular Weight (calculated)
48367.8 Da
IEP (calculated)
5.077
GRAVY (calculated)
0.101
Length
444 amino acids
Sequence
(BLAST)
001: MNLMGCPVIF IKTRLLNGHK WTNPTKPPIL TSLLINLQND GVLIVCVDDE NGTVALADGC VSFTELTQAD ETELPKPEIS PDDTVAIPYS SGTTGLPKGV
101: MITHKSLVTS IAQKVDGENP NLNFTGDDVI ICFLPMFHTY AFNALILSAM RTGAAVLIVP RFELNLVMEL IQRYKVTVVP VAPPVVLAFV KSQETERYDL
201: SSVRMMISGA ATLRKELEEA VLLKFPNAIF GQGYGMTESA TVAKSLSFAK NPFKTKSGAC GTVIRNADMK VVDTITGVSL PRNKAGEICI RGDQLMKGYL
301: TDPEATATTI DKDGWLHTGD IGYVDDDDEI FIVDRLKELI KFKGYQVAPA ELEALLISHP CIEDAAVVAM KDEVAGEVPV AFVVSSEGSQ LTEDDVTSYI
401: CKQVVHYKRV KMVFFTDSIP KAPSGKILRK DLRARLANGL MNLS
Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.