Factsheet for Os06t0656500-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
extracellular 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G496200.1	Wheat	peroxisome	86.4	86.71
EER90150	Sorghum	peroxisome	85.51	85.82
TraesCS7D01G483400.1	Wheat	peroxisome	85.69	85.54
Os02t0177600-01	Rice	plasma membrane	84.26	85.02
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	85.15	80.68
Zm00001d046915_P001	Maize	extracellular	85.51	74.8
GSMUA_Achr9P22840_001	Banana	peroxisome	50.63	74.08
GSMUA_Achr4P12590_001	Banana	peroxisome	64.76	74.03
GSMUA_Achr1P23450_001	Banana	peroxisome	67.8	72.88
GSMUA_AchrUn_...	Banana	peroxisome	67.26	72.59
GSMUA_Achr4P05820_001	Banana	peroxisome	67.08	71.84
GSMUA_Achr7P05070_001	Banana	peroxisome	63.33	71.81
CDY53918	Canola	peroxisome	22.54	67.38
CDY32418	Canola	peroxisome	22.0	67.21
Os08t0448000-01	Rice	peroxisome	64.4	66.79
PGSC0003DMT400074444	Potato	peroxisome	64.58	66.48
Solyc06g068650.2.1	Tomato	peroxisome	64.4	66.3
VIT_11s0052g01090.t01	Wine grape	peroxisome	64.94	66.24
PGSC0003DMT400036886	Potato	peroxisome	64.22	65.87
Solyc03g117870.2.1	Tomato	plastid	63.69	65.32
Os08t0245200-01	Rice	extracellular	65.83	65.25
KRH09616	Soybean	mitochondrion, peroxisome	62.43	64.87
VIT_11s0052g01110.t01	Wine grape	peroxisome	62.25	64.56
KRH02885	Soybean	peroxisome	61.54	64.18
KRH02884	Soybean	peroxisome	62.79	64.17
Bra031266.1-P	Field mustard	peroxisome	62.79	63.59
KRH23700	Soybean	peroxisome	62.08	63.44
CDY19568	Canola	peroxisome	62.43	63.22
CDY43921	Canola	peroxisome	61.9	62.79
CDX87831	Canola	peroxisome	61.72	62.61
Bra030429.1-P	Field mustard	peroxisome	61.54	62.32
AT3G21240.1	Thale cress	peroxisome	61.72	62.05
AT1G51680.1	Thale cress	peroxisome	62.25	62.03
PGSC0003DMT400051216	Potato	peroxisome	62.43	61.12
Solyc07g008360.1.1	Tomato	peroxisome	62.08	61.09
PGSC0003DMT400037485	Potato	peroxisome	59.03	60.22
Os02t0697400-01	Rice	plasma membrane	61.18	60.11
Solyc12g042460.1.1	Tomato	peroxisome	58.68	59.85
KRH02886	Soybean	peroxisome, plastid	56.53	56.03
CDY48875	Canola	mitochondrion, plastid, vacuole	44.36	55.86
CDY06431	Canola	peroxisome	54.38	54.97
CDY68920	Canola	peroxisome	54.2	54.79
Bra031263.1-P	Field mustard	peroxisome	54.02	54.61
CDY19570	Canola	peroxisome	54.38	54.38
AT3G21230.1	Thale cress	peroxisome	55.1	54.04
Bra031265.1-P	Field mustard	peroxisome	54.02	54.02
CDX82208	Canola	peroxisome	55.28	54.02
Bra001819.1-P	Field mustard	peroxisome	54.92	53.48
CDY32416	Canola	peroxisome	54.74	53.31
KRH19011	Soybean	peroxisome	53.13	52.85
Bra001820.1-P	Field mustard	peroxisome	54.92	52.48
CDY06435	Canola	vacuole	36.31	45.62
CDY65966	Canola	peroxisome	27.37	43.34
CDY71190	Canola	peroxisome	28.26	42.7
Os04t0310800-01	Rice	peroxisome	38.28	38.56
Os03t0152400-01	Rice	plasma membrane	37.92	38.41
Os03t0132000-01	Rice	plasma membrane	36.14	36.59
Os10t0578950-00	Rice	peroxisome	34.7	34.77
Os08t0143300-00	Rice	peroxisome, plastid	35.96	34.01
Os07t0280200-01	Rice	peroxisome	32.56	32.62
Os01t0901600-01	Rice	peroxisome, plastid	33.81	31.61
Os07t0639100-00	Rice	peroxisome	31.84	29.97
Os01t0901500-01	Rice	plastid	23.26	29.41

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EntrezGene:4341718	MapMan:7.8.1.1	MapMan:9.2.1.3	EMBL:AK067261
EMBL:AK068985	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAD37587.1	ProteinID:BAD37588.1
ProteinID:BAF20166.1	ProteinID:BAS98942.1	ProteinID:BAS98944.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152	GO:GO:0009698	GO:GO:0009987
GO:GO:0016207	GO:GO:0016874	GO:GO:0019748	EnsemblPlantsGene:Os06g0656500	EnsemblPlants:Os06t0656500-01	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF149	UniProt:Q67W82	SUPFAM:SSF56801
UniParc:UPI0000426312	RefSeq:XP_015643415.1	SEG:seg	:	:	:

Description

4-COUMARATE:COENZYME A LIGASE 44-coumarate:coenzyme A ligase, Lignin biosynthesis, Defense against wounding (Os06t0656500-01);Similar to cDNA clone:J023002B16, full insert sequence. (Os06t0656500-02)

Coordinates

chr6:-:26943193..26949889

Molecular Weight (calculated)

60032.5 Da

IEP (calculated)

4.917

GRAVY (calculated)

0.075

Length

559 amino acids

Sequence
(BLAST)

001: MGSMAAAAEA AQEEETVVFR SKLPDIEIPS HLTLQAYCFE KLPEVAARPC LIDGQTGAVY SYGEVEELSR RAAAGLRRLG VGKGDVVMSL LRNCPEFAFT
101: FLGAARLGAA TTTANPFYTP HEIHRQASAA GARVIVTEAC AVEKVRGFAA DRGIPVVAVD GDFDGCVGFG EAMLDASIEP LDADEEVHPD DVVALPYSSG
201: TTGLPKGVML THRSLVTSVA QQVDGENPNL YFRREDVVLC LLPLFHIYSL NSVLLAGLRA GSAIVIMRKF DLGALVDLTR RHGVTVAPFV PPIVVEIAKS
301: PRVTADDLAS IRMVMSGAAP MGKDLQDAFM AKIPNAVLGQ GYGMTEAGPV LAMCLAFAKE PFEVKSGSCG TVVRNAELKI VDPDTGATLG RNQSGEICIR
401: GEQIMKGYLN DPESTKNTID KGGWLHTGDI GYVDDDDEIF IVDRLKEIIK YKGFQVPPAE LEALLITHPD IKDAAVVPMI DEIAGEVPVA FIVRIEGSAI
501: SENEIKQFVA KEVVFYKRLN KVFFADSIPK SPSGKILRKD LRAKLAAGIP TNDNTQLKS

Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)

001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN

Arabidopsis Description

4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.