Factsheet for Os01t0901600-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0901500-01	Rice	plastid	51.51	69.68
CDY45731	Canola	peroxisome	16.89	65.58
GSMUA_Achr5P25570_001	Banana	peroxisome	53.01	57.43
CDY71478	Canola	vacuole	43.31	56.43
CDY45730	Canola	vacuole	42.64	55.56
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	50.67	55.09
PGSC0003DMT400039281	Potato	peroxisome	48.49	52.54
Solyc03g111170.2.1	Tomato	nucleus	48.33	52.36
KRH63739	Soybean	peroxisome, plastid	50.5	52.07
Bra029229.1-P	Field mustard	peroxisome	48.66	52.06
AT5G63380.1	Thale cress	peroxisome	47.66	50.71
Os07t0280200-01	Rice	peroxisome	47.16	50.54
VIT_14s0171g00300.t01	Wine grape	peroxisome	45.65	50.28
KRG94318	Soybean	peroxisome, plastid	45.32	50.09
VIT_14s0171g00290.t01	Wine grape	peroxisome	44.98	49.72
KRH54211	Soybean	peroxisome	49.5	49.58
KRH57646	Soybean	peroxisome, plastid	44.82	48.55
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.81	47.64
Os03t0132000-01	Rice	plasma membrane	41.14	44.57
Os03t0152400-01	Rice	plasma membrane	35.95	38.95
Os10t0578950-00	Rice	peroxisome	36.29	38.89
Os08t0143300-00	Rice	peroxisome, plastid	36.62	37.06
Os07t0639100-00	Rice	peroxisome	35.95	36.2
Os04t0310800-01	Rice	peroxisome	33.28	35.86
Os08t0448000-01	Rice	peroxisome	32.27	35.81
Os08t0245200-01	Rice	extracellular	33.44	35.46
Os02t0697400-01	Rice	plasma membrane	32.78	34.45
KRH57649	Soybean	plastid	15.89	33.93
Os06t0656500-01	Rice	peroxisome	31.61	33.81
Os02t0177600-01	Rice	plasma membrane	31.27	33.75
KRG94321	Soybean	cytosol, golgi, peroxisome	17.56	33.33

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:AK241420	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	ProteinID:BAB89961.1	ProteinID:BAB90528.1	ProteinID:BAD82770.1	ProteinID:BAS75754.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0016874	EnsemblPlantsGene:Os01g0901600	EnsemblPlants:Os01t0901600-01	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF251	UniProt:Q8RU95	SUPFAM:SSF56801	UniParc:UPI00018132C5	SEG:seg

Description

acyl-CoA synthetase 6Similar to 4-coumarate--CoA ligase-like 6. (Os01t0901600-01)

Coordinates

chr1:+:39257838..39261362

Molecular Weight (calculated)

63261.7 Da

IEP (calculated)

10.099

GRAVY (calculated)

0.111

Length

598 amino acids

Sequence
(BLAST)

001: MSKRSPPPQP AHIPMAEQRW RPPYPYASSA AGGGGVDRRS RSGFCAATRT FHSLRSVGPL PPEELPLTVA AYAFSLLSSA PPLVVAGRGP ALVDAATGIA
101: VSYPAFVARV RFLAGGLWCS LGLRPGDVAL VVSPSCLDVA VLYFALMSIG VVVSPANPAS TADEYAHQVR LSRPAIAFVA PEVAARLPRH VSRVVIGSEV
201: FDRLASASAA GGWAAPPAVA MKQPSTAALL YSSGTTGRVK AVAITHRNLI AQISAYNAIR ETVAREAATD AGKGKPPPPS PSPPAAVTLF PLPLFHVMGF
301: GLLTRTISSG ETAVVMRRFD LAAAARAVER YRVTKLSAAP PVVVALTKSD EARRRDLSSL VAIVVGGAPL GREVSQRFAT VFPSVQIVQS YGLTESTGPV
401: ATMAGPEESA AYGSVGRLAP RVQAKIVDTA TGEVLGPGRR GELWIRGPVV MKGYVGDPEA TAATITPDGW LKTGDLCYFN EDGYLYVVDR LKELIKYKGY
501: QVPPAELEHI LQSRPEIADA AVVPYPDEEA GQLPMAFVVR QPGAYLTEQQ VMNCVAKHVA PYKKVRRVAF VNAIPKSPAG KILRRELVLQ AMASTSRL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.