Factsheet for Os04t0310800-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Os07t0411300-00	endoplasmic reticulum
Os08t0131100-01
Os10t0484800-01	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62940.1	Os08t0131100-01	AT1G01280.1	23632852
AT1G62940.1	Os10t0484800-01	AT1G02050.1	23632852
AT1G62940.1	Os10t0484800-01	AT1G02050.1	23632852
AT1G62940.1	Os07t0411300-00	AT4G34850.1	23632852
AT1G62940.1	Os07t0411300-00	AT4G34850.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	69.37	85.37
Zm00001d003702_P001	Maize	plastid	85.77	78.03
EER99996	Sorghum	plastid	84.32	77.36
TraesCS2A01G272900.1	Wheat	plastid	85.95	76.94
TraesCS2B01G291100.1	Wheat	plastid	85.77	76.9
TraesCS2D01G272200.1	Wheat	plastid	85.41	76.58
GSMUA_Achr6P36020_001	Banana	peroxisome	61.98	69.49
VIT_01s0010g03720.t01	Wine grape	peroxisome	65.05	65.05
CDY39816	Canola	peroxisome	62.16	63.89
AT1G62940.1	Thale cress	peroxisome	61.98	63.47
Solyc02g088710.2.1	Tomato	peroxisome	63.06	63.29
KRH46374	Soybean	peroxisome	62.16	62.39
KRG98485	Soybean	peroxisome	61.98	62.21
KXG26308	Sorghum	peroxisome	57.48	58.53
Zm00001d039274_P003	Maize	peroxisome	84.14	46.33
Os08t0448000-01	Rice	peroxisome	39.1	40.26
Os03t0152400-01	Rice	plasma membrane	38.92	39.13
Os02t0177600-01	Rice	plasma membrane	38.56	38.63
Os03t0132000-01	Rice	plasma membrane	38.38	38.59
Os06t0656500-01	Rice	peroxisome	38.56	38.28
Os02t0697400-01	Rice	plasma membrane	38.38	37.43
Os08t0245200-01	Rice	extracellular	37.84	37.23
Os07t0280200-01	Rice	peroxisome	35.86	35.66
Os01t0901600-01	Rice	peroxisome, plastid	35.86	33.28
Os10t0578950-00	Rice	peroxisome	33.15	32.97
Os08t0143300-00	Rice	peroxisome, plastid	34.41	32.32
Os01t0901500-01	Rice	plastid	25.41	31.9
Os07t0639100-00	Rice	peroxisome	32.79	30.64
Bra036646.1-P	Field mustard	peroxisome	62.52	23.46
CDY03253	Canola	peroxisome	63.06	22.68

Protein Annotations

MapMan:21.8.1.2	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EMBL:AK242522	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EMBL:AP014960	ProteinID:BAF14350.1	ProteinID:CAD37124.3	ncoils:Coil	ProteinID:EAZ30177.1
GO:GO:0000166	GO:GO:0001676	GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009987	GO:GO:0016043	GO:GO:0016874	GO:GO:0031956	GO:GO:0046949	GO:GO:0080110
EnsemblPlantsGene:Os04g0310800	EnsemblPlants:Os04t0310800-01	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF312	UniProt:Q7XXL2	SUPFAM:SSF56801	UniParc:UPI00001B1E9A	SEG:seg	:

Description

acyl-CoA synthetase 9, 4-hydroxycinnamate CoA ligase 4Fatty acyl-CoA synthetase, Pollen exine formation, Anther development, Sporopollenin synthesis (Os04t0310800-01)

Coordinates

chr4:-:14072641..14074737

Molecular Weight (calculated)

59423.7 Da

IEP (calculated)

5.913

GRAVY (calculated)

0.112

Length

555 amino acids

Sequence
(BLAST)

001: MGDAAVPAMV VEEEEQEHVF RSRFPPVAVP DGVTVPEFVL DGAEAYADRV ALVEAAAGGR SYTYGEVARD TARFARALRS VGVRKGHVVV VALPNLAVYP
101: VVSLGIMSAG AVFSGVNPRA LAAEIKKQVE DSEAKLVVAN EVAFDKVKDA GVPVIGVGDR ERMPGAISWD GLLAAADRTG AGVVPVDAAQ QSDLCALPYS
201: SGTTGVSKGV MLSHRNLVSN LCSSMFAVAP ETAGQVVTLG LMPFFHIYGI TGICCATLRH KGTVVVMDRF DLRTFLRALV DHRVMFAPLV PPVMLAMVKS
301: PVADEFDLSD LALKSVMTAA APLAPDLLAA FQRKFPGVQV EEAYGLTEHS CITLTHAAGD GHGHVAKKSS VGFILPNLEV KFVDPDTGRS LPANTPGELC
401: VRSQSVMQGY YKRKEETERT VDGKGWLHTG DVGYIDGDGD VFIVDRIKEL IKYKGFQVAP AELEAVLLSH PSVEDAAVFG VPDEEAGEVP VACVVRRHGA
501: EEGEEEIVAY VAERVASYKR VRVLHIVDAI PKSVSGKILR RQLRDEFIKR MKPSA

Best Arabidopsis Sequence Match ( AT1G62940.1 )
(BLAST)

001: MESQKQEDNE YIFRSLYPSV PIPDKLTLPE FVLQGVEEYT ENVAFVEAVT GKAVTYGDVV RDTKRLAKAL TSLGLRKGQV MVVVLPNVAE YGIIALGIMS
101: AGGVFSGANP TALVSEIKKQ VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ TDLCALPFSS GTTGLQKGVM
201: LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL
301: KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF
401: MNKEETDKTI DEQGWLHTGD IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA ACVVINPKAT EKEEDILNFV
501: AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN KK

Arabidopsis Description

4CLL14-coumarate--CoA ligase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ12]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.