Factsheet for Solyc06g068650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074444	Potato	peroxisome	96.69	96.69
Solyc03g117870.2.1	Tomato	plastid	87.11	86.79
Solyc12g042460.1.1	Tomato	peroxisome	80.29	79.56
GSMUA_Achr4P12590_001	Banana	peroxisome	65.56	72.8
GSMUA_Achr9P22840_001	Banana	peroxisome	50.83	72.25
GSMUA_AchrUn_...	Banana	peroxisome	68.69	72.01
GSMUA_Achr4P05820_001	Banana	peroxisome	69.06	71.84
KRH09616	Soybean	mitochondrion, peroxisome	70.9	71.56
Solyc07g008360.1.1	Tomato	peroxisome	74.4	71.13
KRH23700	Soybean	peroxisome	71.64	71.12
GSMUA_Achr1P23450_001	Banana	peroxisome	67.96	70.96
GSMUA_Achr7P05070_001	Banana	peroxisome	63.9	70.39
Bra030429.1-P	Field mustard	peroxisome	71.27	70.11
CDX87831	Canola	peroxisome	71.09	70.05
AT3G21240.1	Thale cress	peroxisome	71.64	69.96
CDY43921	Canola	peroxisome	70.9	69.87
AT1G51680.1	Thale cress	peroxisome	71.45	69.16
CDY19568	Canola	peroxisome	69.8	68.66
Bra031266.1-P	Field mustard	peroxisome	69.61	68.48
TraesCS6B01G179900.2	Wheat	peroxisome	66.85	66.24
TraesCS6D01G141700.1	Wheat	peroxisome	66.67	65.94
TraesCS6A01G151700.1	Wheat	peroxisome	66.3	65.93
EER90150	Sorghum	peroxisome	67.03	65.35
HORVU6Hr1G030390.2	Barley	peroxisome	65.93	64.74
Os02t0177600-01	Rice	plasma membrane	65.93	64.62
Os06t0656500-01	Rice	peroxisome	66.3	64.4
TraesCS7A01G496200.1	Wheat	peroxisome	65.38	63.73
TraesCS7D01G483400.1	Wheat	peroxisome	65.56	63.57
Os08t0448000-01	Rice	peroxisome	62.98	63.45
EES04623	Sorghum	peroxisome	64.46	63.06
TraesCS2B01G171200.1	Wheat	peroxisome	62.43	62.78
TraesCS2D01G150400.1	Wheat	peroxisome	62.25	62.59
TraesCS2A01G145800.1	Wheat	peroxisome	62.43	62.55
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	66.3	61.02
EES15085	Sorghum	peroxisome	61.69	60.69
Zm00001d032103_P001	Maize	peroxisome	61.88	60.54
Zm00001d015459_P003	Maize	peroxisome	64.27	59.45
Os08t0245200-01	Rice	extracellular	60.96	58.69
Solyc03g097030.2.1	Tomato	peroxisome	61.33	58.42
Zm00001d050224_P002	Maize	peroxisome	58.56	56.79
Zm00001d046915_P001	Maize	extracellular	66.48	56.49
EES13602	Sorghum	peroxisome	59.12	56.22
CDY06435	Canola	vacuole	39.59	48.31
Solyc11g069050.1.1	Tomato	peroxisome	40.15	40.52
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	39.59	39.38
Solyc12g094520.1.1	Tomato	plastid	38.49	37.93
Solyc02g088710.2.1	Tomato	peroxisome	37.94	37.25
Solyc03g111170.2.1	Tomato	nucleus	37.2	36.59
Solyc11g007970.1.1	Tomato	peroxisome	37.38	35.93
Solyc08g076300.2.1	Tomato	peroxisome	35.54	33.62

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	UniProt:K4C839
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF207	SUPFAM:SSF56801
EnsemblPlantsGene:Solyc06g068650.2	EnsemblPlants:Solyc06g068650.2.1	UniParc:UPI0002766589	:	:	:

Description

No Description!

Coordinates

chr6:-:42557748..42561734

Molecular Weight (calculated)

59733.5 Da

IEP (calculated)

5.831

GRAVY (calculated)

0.001

Length

543 amino acids

Sequence
(BLAST)

001: MENETKQDDI IFRSKLPDIY IPNHLPLHSY CFENISEFKS RPCLIDGANN QIYTYADVEL NSRKVAAGLH KQFGIQQKDT IMILLPNSPE FVYVFLGASY
101: LGAISTMANP LFTSAEVVKQ AKASNAKIIV TQSCHVNKVK DYALENGVKI VCIDPAPDGC VHFSELIQAD EHDIPEVKIQ PDDVVALPYS SGTTGLPKGV
201: MLTHKGLVTS VAQQVDGENP NLYIHSEDVL LCVLPLFHIY SLNSVLLCGL RVGAAILIMQ KFDIVPFLEL IQNYKVTIGP FVPPIVLAIA KSPMVDNYDL
301: SSVRTVMSGA APLGKELEDT VRAKFPNAKL GQGYGMTEAG PVLAMCLAFA KEPFEIKSGA CGTVVRNAQM KIVDPDTGKS LPRNQSGEIC IRGDQIMKGY
401: LNDPEATTGT IDKERWLHTG DIGYIDIDDE LFIVDRLKEL IKYKGFQVAP AELEALLLNH PNISDAAVVS MKDEQAGEVP VAFVVRSNGS TITEDEVKEF
501: ITKQVIFYKR IKRVFFVDVV PKSPSGKILR KDLRAKLAAG YPN

Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)

001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN

Arabidopsis Description

4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.