Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- peroxisome 4
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g05260.t01 | Wine grape | peroxisome | 60.0 | 65.7 |
| KRH63132 | Soybean | vacuole | 31.68 | 62.81 |
| KRG92119 | Soybean | peroxisome | 63.01 | 62.57 |
| KRH34672 | Soybean | peroxisome | 61.95 | 61.4 |
| KRH34673 | Soybean | peroxisome | 61.42 | 60.88 |
| GSMUA_AchrUn_... | Banana | peroxisome | 43.72 | 50.31 |
| Solyc12g094520.1.1 | Tomato | plastid | 42.65 | 43.74 |
| Solyc03g111170.2.1 | Tomato | nucleus | 39.82 | 40.76 |
| Solyc08g076300.2.1 | Tomato | peroxisome | 41.24 | 40.59 |
| Solyc11g069050.1.1 | Tomato | peroxisome | 37.88 | 39.78 |
| Solyc03g117870.2.1 | Tomato | plastid | 36.11 | 37.43 |
| Solyc06g068650.2.1 | Tomato | peroxisome | 35.93 | 37.38 |
| Solyc12g042460.1.1 | Tomato | peroxisome | 36.11 | 37.23 |
| Solyc07g008360.1.1 | Tomato | peroxisome | 35.93 | 35.74 |
| Solyc02g088710.2.1 | Tomato | peroxisome | 33.45 | 34.18 |
| Solyc03g097030.2.1 | Tomato | peroxisome | 34.34 | 34.04 |
Protein Annotations
| Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | MapMan:35.1 | InterPro:AMP-bd_C | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | UniProt:K4D558 | PFAM:PF00501 | PFAM:PF13193 | ScanProsite:PS00455 | PANTHER:PTHR24096 |
| PANTHER:PTHR24096:SF213 | SUPFAM:SSF56801 | EnsemblPlantsGene:Solyc11g007970.1 | EnsemblPlants:Solyc11g007970.1.1 | TMHMM:TMhelix | UniParc:UPI000276A5BC |
Description
No Description!
Coordinates
chr11:-:2186357..2189217
Molecular Weight (calculated)
62140.8 Da
IEP (calculated)
6.992
GRAVY (calculated)
-0.004
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSEGELIST QCNYHHQPSF DRKNGYDPET GIYHSVLQHK ISNDYSNLDT ARFVLSQFPS PAQSMSQIAL IDSSTNQKLT YTQLNRSILS LATGLYRALG
101: VRKGDVIFVL SSNSIIYPTI CLAILSIGAI LSPANPLNTE SEIGKQVRLS RAKLAIVAPE EARKLVHTGV PTLLTTRSND ENSISVQELI ENCDPLELPK
201: QSLKPLDTAA ILYSSGTTGV SKGVVITHVN FIAIMKLLKY YVEVTSSQDD VFLCFVPMFH VYGLAFFGLG LFCSGVTTVL MQKFDLQGML EAIQTYKISH
301: IPAVPPVILG LVKYNKGSHY DLSSLRSVTS GAAPLSKEVA DAFREKFPWV ELKQGYGLTE TTGAATFFVN YEEAKARPSS VGELFPGFSA KVINHETREA
401: SPPFKEGELW LKGPGIMKEY FGNEEATSAT ITKDGWLKTG DLCYFDDKGY LYIVDRIKEL IKHNGYQVAP AELEAILLSH HEIIDAAVVP LEDEVAGQIP
501: LAYVVRAANS GLTQDQVIQF VSSQVAPYKK VRRVNFINAI PRSAAGKILR KELVLQSNIS ILSKL
101: VRKGDVIFVL SSNSIIYPTI CLAILSIGAI LSPANPLNTE SEIGKQVRLS RAKLAIVAPE EARKLVHTGV PTLLTTRSND ENSISVQELI ENCDPLELPK
201: QSLKPLDTAA ILYSSGTTGV SKGVVITHVN FIAIMKLLKY YVEVTSSQDD VFLCFVPMFH VYGLAFFGLG LFCSGVTTVL MQKFDLQGML EAIQTYKISH
301: IPAVPPVILG LVKYNKGSHY DLSSLRSVTS GAAPLSKEVA DAFREKFPWV ELKQGYGLTE TTGAATFFVN YEEAKARPSS VGELFPGFSA KVINHETREA
401: SPPFKEGELW LKGPGIMKEY FGNEEATSAT ITKDGWLKTG DLCYFDDKGY LYIVDRIKEL IKHNGYQVAP AELEAILLSH HEIIDAAVVP LEDEVAGQIP
501: LAYVVRAANS GLTQDQVIQF VSSQVAPYKK VRRVNFINAI PRSAAGKILR KELVLQSNIS ILSKL
001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL
Arabidopsis Description
4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.