Factsheet for GSMUA_AchrUn_randomP08830_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63132	Soybean	vacuole	29.94	51.58
VIT_13s0019g05260.t01	Wine grape	peroxisome	51.73	49.22
KRH34672	Soybean	peroxisome	50.92	43.86
KRG92119	Soybean	peroxisome	50.71	43.76
Solyc11g007970.1.1	Tomato	peroxisome	50.31	43.72
KRH34673	Soybean	peroxisome	49.49	42.63
GSMUA_Achr8P14210_001	Banana	peroxisome	41.96	41.53
GSMUA_Achr8P13230_001	Banana	peroxisome	41.75	40.76
GSMUA_Achr5P19650_001	Banana	peroxisome	39.92	40.33
GSMUA_Achr9P07820_001	Banana	peroxisome	14.87	40.11
GSMUA_Achr5P25570_001	Banana	peroxisome	44.4	39.49
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	27.29	39.41
GSMUA_Achr9P22840_001	Banana	peroxisome	29.74	38.22
GSMUA_Achr1P13470_001	Banana	peroxisome	40.12	38.18
GSMUA_Achr7P05070_001	Banana	peroxisome	36.66	36.51
GSMUA_Achr11P...	Banana	peroxisome	40.12	36.21
GSMUA_AchrUn_...	Banana	peroxisome	40.12	35.88
GSMUA_AchrUn_...	Banana	peroxisome	37.68	35.71
GSMUA_Achr1P23450_001	Banana	peroxisome	37.27	35.19
GSMUA_Achr4P05820_001	Banana	peroxisome	35.64	33.52
GSMUA_Achr11P...	Banana	peroxisome, plastid	36.05	33.21
GSMUA_Achr4P12590_001	Banana	peroxisome	32.99	33.13
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	35.64	32.53
GSMUA_Achr6P36020_001	Banana	peroxisome	32.79	32.53

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP08830_001	EnsemblPlants:GSMUA_AchrUn_randomT08830_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG08830_001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF213	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg
SUPFAM:SSF56801	UniParc:UPI000295D83E	UniProt:M0U7J3	MapMan:35.1	:	:

Description

Putative 4-coumarate--CoA ligase-like 5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08830_001]

Coordinates

chrchrUn_random:+:40329808..40332743

Molecular Weight (calculated)

52189.9 Da

IEP (calculated)

7.966

GRAVY (calculated)

0.049

Length

491 amino acids

Sequence
(BLAST)

001: MDAPTLVEHL KHEEEDTQSG FCPRSGIFRS LHRLAPRHRP PSDPSLDAAS FVFSLLPSHE STRPVLLDST TGRRLTFSDL RRSALSLAAA LHHAFGLRPG
101: DVVLLLSPNT AHKAAAAIGW GDPLEAPPPA RGQSDVAVVL YSSGTTGAPK GVMLTHGNLI AIVSLLRWSA EVSGSEGDVY LAFVPMSHVY GMAFFALGLP
201: AAGATTVVMR RFEMGAAMQA VARHGVTNIP AVPPVVAALA KFSGGWDLSG LRRVATGAAA VGAEAASGFR RRYPWVELRE GYGLTESGGA ATFSVAASRR
301: PEGRGVGQLL PGFEARVVAA EAGERAVGPG GVGELWLRGP TVMKGYLGDE AATAEALPGG GWLRTGDLVR FDEDGFLFVV DRIKELIKHK GYQVTPSELE
401: AVLLAHPHIL DAAVVPLEDE EAGEVPMAYV VRSPESQLTS EEIIQFVAAQ VAPYKKIRRV AFISTIPRSP AGKILRKQLM DKTHPAILPK L

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.