Factsheet for GSMUA_Achr9P07820_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P13470_001	Banana	peroxisome	52.75	18.6
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	34.07	18.24
GSMUA_Achr5P25570_001	Banana	peroxisome	52.2	17.21
GSMUA_Achr9P22840_001	Banana	peroxisome	35.71	17.02
GSMUA_Achr5P19650_001	Banana	peroxisome	41.76	15.64
GSMUA_Achr8P13230_001	Banana	peroxisome	42.86	15.51
GSMUA_Achr8P14210_001	Banana	peroxisome	41.76	15.32
GSMUA_AchrUn_...	Banana	peroxisome	40.11	14.87
GSMUA_Achr6P36020_001	Banana	peroxisome	38.46	14.14
GSMUA_AchrUn_...	Banana	peroxisome	42.31	14.03
GSMUA_Achr7P05070_001	Banana	peroxisome	37.91	14.0
GSMUA_Achr4P12590_001	Banana	peroxisome	37.36	13.91
GSMUA_Achr11P...	Banana	peroxisome	40.11	13.42
GSMUA_AchrUn_...	Banana	peroxisome	37.91	13.32
GSMUA_Achr1P23450_001	Banana	peroxisome	37.91	13.27
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	39.01	13.2
GSMUA_Achr11P...	Banana	peroxisome, plastid	37.91	12.95
GSMUA_Achr4P05820_001	Banana	peroxisome	36.26	12.64

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07820_001	EnsemblPlants:GSMUA_Achr9T07820_001	EnsemblPlantsGene:GSMUA_Achr9G07820_001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	SUPFAM:SSF56801	UniParc:UPI000295A6A3	UniProt:M0TYE1
MapMan:35.1	:	:	:	:	:

Description

AMP-binding domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G07820_001]

Coordinates

chr9:+:5011906..5012678

Molecular Weight (calculated)

19939.2 Da

IEP (calculated)

8.461

GRAVY (calculated)

0.093

Length

182 amino acids

Sequence
(BLAST)

001: MQTITNGNTA VIYKANGRAF DSSGWLKTGD LCYFDGDGLL FVLDRLKELI KYKAYQVPLA ELEHLLQSLP GVADAAVVTI LSLSLSLCAN GSYPDAEAGQ
101: IPVAFIVRQP GHDLTQAQVM GFVAEKVAAY KKKFRGVVFT NSIPKTAYGK ILRSQPRNHV ETVKWQTTCD TVPCILCHLY GI

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.