Factsheet for GSMUA_Achr11P06230_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	54.6	87.35
KRH74284	Soybean	peroxisome	56.25	55.33
TraesCS1D01G200200.1	Wheat	peroxisome	55.7	53.35
TraesCS1A01G196700.1	Wheat	peroxisome	55.7	53.35
KXG38810	Sorghum	peroxisome	55.88	53.05
Os10t0578950-00	Rice	peroxisome	54.41	53.05
AT4G19010.1	Thale cress	peroxisome, plastid	54.41	52.3
PGSC0003DMT400024014	Potato	peroxisome	55.15	52.26
TraesCS1B01G211300.1	Wheat	peroxisome	56.25	52.13
Solyc08g076300.2.1	Tomato	peroxisome	54.41	51.57
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	53.49	50.96
Bra013369.1-P	Field mustard	peroxisome, plastid	53.68	50.96
Os08t0143300-00	Rice	peroxisome, plastid	54.23	49.92
Zm00001d030132_P002	Maize	peroxisome	56.8	48.58
HORVU1Hr1G051190.2	Barley	peroxisome	55.15	47.17
KRH39635	Soybean	cytosol, golgi, peroxisome	42.1	45.98
GSMUA_Achr8P14210_001	Banana	peroxisome	37.5	41.13
GSMUA_Achr5P19650_001	Banana	peroxisome	36.03	40.33
GSMUA_AchrUn_...	Banana	peroxisome	36.21	40.12
GSMUA_Achr9P07820_001	Banana	peroxisome	13.42	40.11
GSMUA_Achr8P13230_001	Banana	peroxisome	36.21	39.16
CDX99401	Canola	peroxisome	47.61	38.77
GSMUA_Achr7P05070_001	Banana	peroxisome	33.27	36.71
GSMUA_AchrUn_...	Banana	peroxisome	34.56	36.29
GSMUA_AchrUn_...	Banana	peroxisome	36.21	35.88
GSMUA_Achr5P25570_001	Banana	peroxisome	36.4	35.87
GSMUA_Achr6P36020_001	Banana	peroxisome	32.54	35.76
GSMUA_Achr1P23450_001	Banana	peroxisome	33.64	35.19
GSMUA_Achr9P22840_001	Banana	peroxisome	24.45	34.82
GSMUA_Achr1P13470_001	Banana	peroxisome	32.9	34.69
GSMUA_Achr4P12590_001	Banana	peroxisome	30.51	33.95
GSMUA_Achr4P05820_001	Banana	peroxisome	32.17	33.52
GSMUA_Achr11P...	Banana	peroxisome, plastid	32.17	32.83
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	32.17	32.53

Protein Annotations

Gene3D:2.30.38.10	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	Gene3D:3.40.50.980	MapMan:35.1	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G06230_001	EnsemblPlants:GSMUA_Achr11P06230_001	EnsemblPlants:GSMUA_Achr11T06230_001
UniProt:M0RPV3	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0002954458	SEG:seg	:	:

Description

4-coumarate--CoA ligase-like 6 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06230_001]

Coordinates

chr11:-:4838880..4844399

Molecular Weight (calculated)

59224.8 Da

IEP (calculated)

8.616

GRAVY (calculated)

0.151

Length

544 amino acids

Sequence
(BLAST)

001: MEAIPRQSPT SGFFSPETGI YRSKHRPAAL PQDPFVDLVS YVFSFPHQGV TALVDSRSGA SIAYAELRGM VRSLAAGLSR DGITSKDVVL VMIPNSILFP
101: IKKQMSLCRF TFIFTVPSNV AKLGGLGVKI VTVPEEPEPV IRQTDAAAIL FSSGTTGASK GVVLTHRNLI ATVELFVRSE ASLYGSESWR NVYLTAIPMF
201: HVYGLSLFSM GLLSLGSTIV VMRKFDVEET VRAIDAFKVT HFPAVPPIMT ALIRAKGATG CRLQSLVQVS CGAAPIAPKT IHDFLKAFPH VDFIQMFIYI
301: LNDYNLTSLM SIYSKRDETI NTYIYEDQTA TLLFTIHGYG LTESAAVGTR GFNTINCRRH ISVGLLAPNM QAKIIDLETG SCLPPGTSGE LLLHGAAIMK
401: GYLNDDNATS SAIIKDGWLK TGDIAYFDGD GYLYISDRLK ETIKYKGFQI APADLEALLN AHPDIVDAAV TAAKNEEAGE IPVAFVVTRS GSKLSSTDVI
501: EFVAKQVTPY KKVREVIFVN SIPRSPAGKT LRRELRDTLA ASRM

Best Arabidopsis Sequence Match ( AT4G19010.1 )
(BLAST)

001: MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV
101: VSLVLPNSVY FPMIFLSLIS LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI ENPKFYSIMK ESFGFVPKPL
201: IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT
301: HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS
401: FLPPGNRGEL WIQGPGVMKG YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS HPLIIDAAVT AAPNEECGEI
501: PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS IPKSPTGKIL RKELKRILTN SVSSRL

Arabidopsis Description

4CLL64-coumarate--CoA ligase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84P24]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.