Factsheet for VIT_13s0019g05260.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63132	Soybean	vacuole	36.05	65.26
KRG92119	Soybean	peroxisome	69.57	63.09
KRH34672	Soybean	peroxisome	69.19	62.63
KRH34673	Soybean	peroxisome	67.64	61.23
Solyc11g007970.1.1	Tomato	peroxisome	65.7	60.0
GSMUA_AchrUn_...	Banana	peroxisome	49.22	51.73
VIT_18s0001g00290.t01	Wine grape	peroxisome	45.74	42.99
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	45.35	42.62
VIT_14s0171g00300.t01	Wine grape	peroxisome	43.99	41.8
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	43.99	41.27
VIT_06s0061g00450.t01	Wine grape	peroxisome	43.41	41.18
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	42.05	39.45
VIT_08s0007g05050.t01	Wine grape	plastid	40.5	39.43
VIT_14s0171g00290.t01	Wine grape	peroxisome	41.09	39.19
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	41.47	37.48
VIT_16s0039g02040.t01	Wine grape	peroxisome	37.98	35.77
VIT_11s0052g01110.t01	Wine grape	peroxisome	36.43	34.88
VIT_01s0010g03720.t01	Wine grape	peroxisome	37.21	34.59
VIT_11s0052g01090.t01	Wine grape	peroxisome	35.66	33.58

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
ProteinID:CCB56130	ProteinID:CCB56130.1	UniProt:F6HNB1	EMBL:FN595998	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF213	SUPFAM:SSF56801	TMHMM:TMhelix
UniParc:UPI0002109678	ArrayExpress:VIT_13s0019g05260	EnsemblPlantsGene:VIT_13s0019g05260	EnsemblPlants:VIT_13s0019g05260.t01	SEG:seg	:

Description

No Description!

Coordinates

chr13:+:7072669..7075034

Molecular Weight (calculated)

55531.0 Da

IEP (calculated)

6.933

GRAVY (calculated)

0.068

Length

516 amino acids

Sequence
(BLAST)

001: MSAEEEMDAA AEQRLGGSPP DFDGRSGFDS RTGVYSSLIK LGGQHRVPTR PDLDTATFVL SQFPAPDCAE SRVALIDSAT GRRVTYAELR RSIRMLATGL
101: YHGLGIRKGD VVFLLAPNSL LYPTICLAVL SIGAVLTTAN PLNTQSEISK QVDDSGAKVA ISAPEELHKL LQTGVPTLLT HRTSQMSQSD TAAILYSSGT
201: TGTSKGVILT HAKFIAMMTL LKWSVDITSS NNDVFLCFIP MFHIYGLAFF ALGLLPVPPV ILGLVKNSSS CDLSSLRRVG SGAAPLSKEV AEGFREKFPW
301: VELRTGYGLT ESCGAATYFV TDEQAKARAG SSGRLLPRFC AKVVDTETGL ALPPNREGEL WLKSPTVMKG YLGNAEATAA TITSDGWLRT GDLCYFDEDG
401: FLYIVDRIKE LIKHNGYQVA PAELEAILLS HPSVLDAAVI PVEDEAAGQI PMAYVVRAGG SELTQQEVIQ FVAGQVAPYK KVRKVGFINA IPRSTAGKIL
501: RKQLVLLSQQ EVISKL

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.