Factsheet for TraesCS2B01G171200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	endoplasmic reticulum, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G150400.1	Wheat	peroxisome	98.52	98.52
TraesCS2A01G145800.1	Wheat	peroxisome	97.22	96.86
Os08t0448000-01	Rice	peroxisome	87.96	88.13
EES15085	Sorghum	peroxisome	85.56	83.7
Zm00001d032103_P001	Maize	peroxisome	85.56	83.24
GSMUA_Achr9P22840_001	Banana	peroxisome	49.07	69.37
GSMUA_Achr4P12590_001	Banana	peroxisome	62.04	68.51
GSMUA_Achr4P05820_001	Banana	peroxisome	65.93	68.2
GSMUA_AchrUn_...	Banana	peroxisome	65.19	67.95
CDY53918	Canola	peroxisome	23.52	67.91
GSMUA_Achr1P23450_001	Banana	peroxisome	65.37	67.88
GSMUA_Achr7P05070_001	Banana	peroxisome	60.74	66.53
CDY32418	Canola	peroxisome	22.22	65.57
TraesCS6B01G179900.2	Wheat	peroxisome	65.56	64.6
PGSC0003DMT400074444	Potato	peroxisome	63.52	63.17
VIT_11s0052g01090.t01	Wine grape	peroxisome	63.89	62.96
CDY43921	Canola	peroxisome	63.89	62.61
Solyc03g117870.2.1	Tomato	plastid	63.15	62.57
CDX87831	Canola	peroxisome	63.7	62.43
Solyc06g068650.2.1	Tomato	peroxisome	62.78	62.43
PGSC0003DMT400036886	Potato	peroxisome	62.96	62.39
Bra030429.1-P	Field mustard	peroxisome	63.7	62.32
KRH02885	Soybean	peroxisome	61.85	62.31
Bra031266.1-P	Field mustard	peroxisome	63.52	62.14
CDY19568	Canola	peroxisome	63.52	62.14
AT3G21240.1	Thale cress	peroxisome	63.89	62.05
AT1G51680.1	Thale cress	peroxisome	64.26	61.85
KRH02884	Soybean	peroxisome	62.59	61.79
VIT_11s0052g01110.t01	Wine grape	peroxisome	61.48	61.6
KRH09616	Soybean	mitochondrion, peroxisome	60.74	60.97
KRH23700	Soybean	peroxisome	61.11	60.33
PGSC0003DMT400051216	Potato	peroxisome	62.96	59.54
Solyc07g008360.1.1	Tomato	peroxisome	62.59	59.51
PGSC0003DMT400037485	Potato	peroxisome	59.26	58.39
Solyc12g042460.1.1	Tomato	peroxisome	59.07	58.21
TraesCS6B01G294100.1	Wheat	peroxisome	61.67	58.12
KRH02886	Soybean	peroxisome, plastid	59.81	57.27
CDY06431	Canola	peroxisome	57.78	56.42
CDY68920	Canola	peroxisome	57.78	56.42
Bra031263.1-P	Field mustard	peroxisome	57.59	56.24
CDY48875	Canola	mitochondrion, plastid, vacuole	45.93	55.86
CDY19570	Canola	peroxisome	57.78	55.81
AT3G21230.1	Thale cress	peroxisome	58.89	55.79
Bra031265.1-P	Field mustard	peroxisome	57.59	55.64
CDX82208	Canola	peroxisome	57.78	54.55
CDY32416	Canola	peroxisome	57.59	54.18
Bra001819.1-P	Field mustard	peroxisome	57.59	54.18
Bra001820.1-P	Field mustard	peroxisome	57.41	52.99
KRH19011	Soybean	peroxisome	54.63	52.49
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	52.96	52.38
CDY71190	Canola	peroxisome	31.3	45.68
CDY65966	Canola	peroxisome	29.26	44.76
CDY06435	Canola	vacuole	36.85	44.72
TraesCS4B01G269200.1	Wheat	peroxisome	42.78	41.62
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	38.7	37.86
TraesCS4B01G075900.1	Wheat	plastid	35.37	35.17
TraesCS3B01G426300.1	Wheat	peroxisome	36.48	35.05
TraesCS2B01G291100.1	Wheat	plastid	39.07	34.09
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	35.0	33.75
TraesCS1B01G211300.1	Wheat	peroxisome	36.67	33.73
TraesCS4B01G076100.1	Wheat	peroxisome	32.22	32.04
TraesCS5B01G570100.1	Wheat	peroxisome	32.78	31.95
TraesCS4B01G076000.1	Wheat	peroxisome	32.04	31.4
TraesCS3B01G515400.1	Wheat	peroxisome	31.3	30.73

Protein Annotations

EnsemblPlants:TraesCS2B01G171200.1	EnsemblPlantsGene:TraesCS2B01G171200	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF244	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:	:

Description

No Description!

Coordinates

chr2B:-:144432166..144433982

Molecular Weight (calculated)

57384.8 Da

IEP (calculated)

5.750

GRAVY (calculated)

0.173

Length

540 amino acids

Sequence
(BLAST)

001: MGSLPEQQQV VFRSTLPDIA IPDHLPLHDY VFERLAERRD RACLIDGATG ETLTVGDVHR LSRRVAAGLY SLGVRHGSTV MLLLPNCVEF ALAFLAASRL
101: GAATTTANPL HTPPEIAKQA AASRATLVVT EPAFVAKVRG LAGVTVVATG DGAEGCASFA DLAAADDSAL PEAPIDVAND VVALPYSSGT TGLPKGVMLS
201: HRGLVTSVAQ LVDGDNPNLH LREDDVVLCV LPMFHVYSLH SILLCGLRAG AALVVMKRFD TVKMMELVER HGITIAPLVP PIVVEMAKGD ALDRHDLSSV
301: RMVISGAAPM GKELQDIIHA KLPNAVLGQG YGMTEAGPVL SMCMAFAKEP SPVKSGACGT VVRNAELKIV DPETGLCLGR NQPGEICIRG RQIMKGYLDN
401: PEATAETVDK DGWLHTGDVG FVDADDEIFI VDRLKELIKY KGFQVAPAEL EAMLIAHPGI ADAAVVPMKD DASGEVPVAF VVPSPDGADM TEDEIKQYVA
501: KQVVFYKRLQ KVFFVSSIPK APSGKILRKD LRAKLAAGSC

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.