Factsheet for TraesCS3B01G515400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
mitochondrion 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G468000.1	Wheat	peroxisome	94.36	93.68
TraesCS3A01G472200.1	Wheat	peroxisome	93.27	93.27
TraesCS4B01G076000.1	Wheat	peroxisome	89.09	88.93
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	89.09	84.48
TraesCS4B01G076100.1	Wheat	peroxisome	81.82	82.87
TraesCS5B01G570100.1	Wheat	peroxisome	80.36	79.78
Os07t0280200-01	Rice	peroxisome	71.45	70.43
Zm00001d019957_P002	Maize	peroxisome	72.18	69.77
EER98656	Sorghum	peroxisome, plastid	70.36	69.73
CDY45731	Canola	peroxisome	17.82	63.64
GSMUA_Achr1P13470_001	Banana	peroxisome	52.73	56.2
TraesCS3B01G426300.1	Wheat	peroxisome	50.91	49.82
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	49.64	49.64
TraesCS4B01G075900.1	Wheat	plastid	48.36	48.99
CDY71478	Canola	vacuole	40.55	48.58
CDY45730	Canola	vacuole	40.55	48.58
PGSC0003DMT400039281	Potato	peroxisome	48.73	48.55
Solyc03g111170.2.1	Tomato	nucleus	48.18	48.01
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	48.36	47.5
KRH63739	Soybean	peroxisome, plastid	49.82	47.24
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.36	46.96
VIT_14s0171g00290.t01	Wine grape	peroxisome	45.64	46.4
Bra029229.1-P	Field mustard	peroxisome	47.09	46.33
KRH54211	Soybean	peroxisome	49.64	45.73
AT5G63380.1	Thale cress	peroxisome	45.82	44.84
KRG94318	Soybean	peroxisome, plastid	43.64	44.36
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.82	43.82
KRH57646	Soybean	peroxisome, plastid	43.45	43.3
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	39.64	39.49
TraesCS4B01G269200.1	Wheat	peroxisome	38.36	38.02
TraesCS1B01G211300.1	Wheat	peroxisome	37.45	35.09
KRH57649	Soybean	plastid	16.55	32.5
TraesCS6B01G179900.2	Wheat	peroxisome	31.27	31.39
TraesCS2B01G171200.1	Wheat	peroxisome	30.73	31.3
TraesCS2B01G291100.1	Wheat	plastid	35.09	31.18
TraesCS6B01G294100.1	Wheat	peroxisome	31.45	30.19
KRG94321	Soybean	cytosol, golgi, peroxisome	17.27	30.16

Protein Annotations

EnsemblPlants:TraesCS3B01G515400.1	EnsemblPlantsGene:TraesCS3B01G515400	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:757781353..757785762

Molecular Weight (calculated)

58193.9 Da

IEP (calculated)

8.866

GRAVY (calculated)

0.218

Length

550 amino acids

Sequence
(BLAST)

001: MSSSAHGAID ARTGYCATTK SFISLRGPLP LPPADVPLTF PAFALSLLPS PHPAHPALLD AATGEAVSYP AFLSQVRALV GALRSRVVPL GRGDVAFVLA
101: PARLDVPVLY FALLAAGVVV APANPALTAG EVSRLVSLSG ASFAFAVSAT AAKLPAGLPT ILLDSPHFRS LLHSDHGENE SAPLDAGAVC QSATATILYS
201: SGTTGRVKAA AVPHRSFIAR AAGLRALHVK VKSRKANERT LIGAPMFHTM GFFFTLNGLA QGSTTVVMTE AAARAGLRGM LEAARRWEVT EIMAAPPVVL
301: GMTKDGCRLT SLVRVICGGA PLPGSVAEQF PRRFPHVDLC MGYGSTEAGG ISLMIDRDEC SRIGSSGRIS HNVVAKIVGI LTGEPLSVGQ KGELWVRGPS
401: IMTGYVGDDE ANAATFDSEG RLKTGDLCYI DQDGFLFVVD RLKELIKYKA YQVAPAELEL VLQSLPEIVD AAVMPYPHEE AGEIPMALVV RQPGSKVTEA
501: QVMEHVAKQV APYMKVRRVL FVDSIPRSPA GKILRRQLKD HMQSCIVSRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.