CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019957_P002	Maize	peroxisome	91.35	89.1
Os07t0280200-01	Rice	peroxisome	74.59	74.19
TraesCS4A01G239000.1	Wheat	peroxisome	72.25	72.78
TraesCS4B01G076000.1	Wheat	peroxisome	71.35	71.87
TraesCS4D01G074600.1	Wheat	peroxisome	71.35	71.87
TraesCS3A01G472200.1	Wheat	peroxisome	70.45	71.09
TraesCS3B01G515400.1	Wheat	peroxisome	69.73	70.36
TraesCS3D01G468000.1	Wheat	peroxisome	69.73	69.86
TraesCS4D01G074700.1	Wheat	peroxisome	68.65	69.78
HORVU4Hr1G012680.8	Barley	peroxisome	69.91	69.66
HORVU4Hr1G012660.1	Barley	peroxisome	67.75	69.5
TraesCS4B01G076100.1	Wheat	peroxisome	67.39	68.88
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	69.55	66.55
TraesCS5B01G570100.1	Wheat	peroxisome	66.31	66.43
TraesCS5D01G561500.1	Wheat	peroxisome	66.31	66.31
CDY45731	Canola	peroxisome	17.48	62.99
TraesCS4A01G238800.1	Wheat	plastid	48.47	62.27
GSMUA_Achr1P13470_001	Banana	peroxisome	54.77	58.91
KXG38162	Sorghum	peroxisome	53.87	53.11
EES01913	Sorghum	peroxisome, plastid	50.99	50.99
EER97853	Sorghum	peroxisome, plastid	50.09	50.27
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	49.19	49.64
CDY71478	Canola	vacuole	39.64	47.93
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.85	47.88
CDY45730	Canola	vacuole	39.46	47.71
Solyc03g111170.2.1	Tomato	nucleus	47.21	47.46
PGSC0003DMT400039281	Potato	peroxisome	47.21	47.46
KRH63739	Soybean	peroxisome, plastid	49.19	47.07
OQU88316	Sorghum	peroxisome, plastid	50.45	46.82
VIT_14s0171g00290.t01	Wine grape	peroxisome	44.86	46.03
KRH54211	Soybean	peroxisome	49.01	45.56
Bra029229.1-P	Field mustard	peroxisome	45.77	45.44
AT5G63380.1	Thale cress	peroxisome	45.95	45.37
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.78	44.18
KRG94318	Soybean	peroxisome, plastid	43.06	44.18
KRH57646	Soybean	peroxisome, plastid	43.78	44.02
EER95569	Sorghum	peroxisome	41.98	42.13
OQU91476	Sorghum	peroxisome	39.46	39.32
KXG40154	Sorghum	peroxisome	38.2	38.34
KXG38810	Sorghum	peroxisome	37.48	36.3
EES13602	Sorghum	peroxisome	34.41	33.45
EER99996	Sorghum	plastid	36.22	33.22
EER90150	Sorghum	peroxisome	32.79	32.67
EES04623	Sorghum	peroxisome	32.61	32.61
EES15085	Sorghum	peroxisome	32.07	32.25
KRH57649	Soybean	plastid	16.22	32.14
EES05680	Sorghum	peroxisome	32.43	31.8
KRG94321	Soybean	cytosol, golgi, peroxisome	18.02	31.75
KXG26308	Sorghum	peroxisome	21.98	22.39

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EntrezGene:8064652	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	UniProt:C5X8C9	EnsemblPlants:EER98656	ProteinID:EER98656	ProteinID:EER98656.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF269	EnsemblPlantsGene:SORBI_3002G158900	SUPFAM:SSF56801	UniParc:UPI0001A83BF3	RefSeq:XP_002462135.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:49091330..49097719

Molecular Weight (calculated)

58937.2 Da

IEP (calculated)

8.936

GRAVY (calculated)

0.092

Length

555 amino acids

Sequence
(BLAST)

001: MATPAPAANA DGAAPGGVDS RSGYCEVTRT FRSLRPPVPL PPPDAPVSFP EFAFSRLTSS PLPAHPALLD AATGEVLSFP EFLSQVRALA GALRSVVRLG
101: RGDVAFILAP TRLDIPVLYF ALLSFGAVVS PVNPTLTADE VARLVALSGA SVAFAVSATT AKLPAGLPTI LLDSDRFRSF LQRQNDGRGE EGLAEVRQSD
201: TAVIQYSSGT TGRVKAAALP HRSFVAMVAG AHAVLGKPRH GRERTLLGAP MFHSLGFYSA LKGVALGHTT VVVTDAVARR GVKGVVEAAE RWAVAEMTAS
301: PPVVVAMAKE RCRLEALERV VCGGAPLPRT AADSFRRRFP NVDLCMGYGS TEAGGISLMI SREECARIGS AGRVSENVEV KIVDHVTGNA LSVGQKGELL
401: VRGPAVMTGY VGDEEANASS FDSEGWLRTG DLCYIDQDGF LFVVDRLKEL IKYKGYQVPP AELELVLQSL PEVIDAAVMP YPHEEAGQIP VALVVRQPGS
501: KVTEAQVIDH VAKRVAPYKK IRKVLFVDSI PKSPAGKILR RQLTNHVQAG AVSRM

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.