CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018660_P001	Maize	peroxisome	80.29	78.86
OQU88316	Sorghum	peroxisome, plastid	81.92	75.75
TraesCS4D01G074500.1	Wheat	plastid	69.62	70.9
TraesCS4A01G239100.2	Wheat	plastid	68.54	69.8
TraesCS4B01G075900.1	Wheat	plastid	67.63	68.88
HORVU4Hr1G012630.3	Barley	peroxisome	68.35	65.85
CDY45731	Canola	peroxisome	16.64	59.74
CDY45730	Canola	vacuole	41.95	50.54
CDY71478	Canola	vacuole	41.59	50.11
EER98656	Sorghum	peroxisome, plastid	50.27	50.09
EES01913	Sorghum	peroxisome, plastid	50.09	49.91
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	49.19	49.45
VIT_14s0171g00300.t01	Wine grape	peroxisome	47.92	48.8
Bra029229.1-P	Field mustard	peroxisome	48.46	47.94
KRG94318	Soybean	peroxisome, plastid	46.84	47.87
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	47.2	47.45
PGSC0003DMT400039281	Potato	peroxisome	47.2	47.28
Solyc03g111170.2.1	Tomato	nucleus	46.84	46.92
VIT_14s0171g00290.t01	Wine grape	peroxisome	45.57	46.58
KXG38162	Sorghum	peroxisome	47.2	46.36
KRH57646	Soybean	peroxisome, plastid	45.75	45.83
AT5G63380.1	Thale cress	peroxisome	46.29	45.55
KRH63739	Soybean	peroxisome, plastid	46.84	44.66
EER95569	Sorghum	peroxisome	44.12	44.12
KRH54211	Soybean	peroxisome	45.93	42.55
OQU91476	Sorghum	peroxisome	39.78	39.5
KXG38810	Sorghum	peroxisome	40.14	38.74
KXG40154	Sorghum	peroxisome	37.07	37.07
EER90150	Sorghum	peroxisome	35.44	35.19
EES04623	Sorghum	peroxisome	35.08	34.95
EES15085	Sorghum	peroxisome	33.82	33.88
KRG94321	Soybean	cytosol, golgi, peroxisome	18.99	33.33
EES13602	Sorghum	peroxisome	34.36	33.27
KRH57649	Soybean	plastid	16.82	33.21
EES05680	Sorghum	peroxisome	33.82	33.04
EER99996	Sorghum	plastid	34.72	31.74
KXG26308	Sorghum	peroxisome	21.16	21.47

Protein Annotations

EnsemblPlants:EER97853	EnsemblPlantsGene:SORBI_3002G009600	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF298	PFAM:PF00501	PFAM:PF13193	ProteinID:EER97853	ProteinID:EER97853.2	ScanProsite:PS00455
SEG:seg	SUPFAM:SSF56801	UniParc:UPI0003C69165	UniProt:C5X7A2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:-:852347..855073

Molecular Weight (calculated)

59123.5 Da

IEP (calculated)

7.935

GRAVY (calculated)

0.143

Length

553 amino acids

Sequence
(BLAST)

001: MAPAPCDLEI DPRSGYCAAT RTFHSLRSPA PLPPPDLPLS FPTFALSFLP DPLPPSSRPA LVDAGTGEAV PFPAFLSRTR VLAAALRARG GLSPGDVAFV
101: LAPADVHVPV LYYALMAIGA VVSPANPALT AAEVSRLLAL SNPRVAFAVA STRDKLPPGL RTVLLDSPTF LSFLHESEPE LEPQQQVVVR QSDPAAVLYS
201: SGTTGRAKAV VLTHRNLMPS VATQAPAPGP EVFMVAVPLF HIYGFTFCLS VVSAAHTLVL HTSRRRFDAT AVLADIPRFG VTRLALAPPA LLAIVRAAEE
301: DAGAVATATG LSTLKAVSCG GAAVSANHIA RFSRRFPGVS LAQGYGLTET TSGFCRAVGD EESARIGSVG RLSWGAEVKI VHPETGAAMP PGVPGELWVR
401: GPFVMKGYLG EKDATSEILD SEGWLRTGDV CYIDQDGFVY IVDRLKELIK YKGYQVPPAE LENLLQTHRE IDEAAVIPYP DEEAGELPVA FIVRRPGSHL
501: HESHIKEFVA KQVVHYKRIH HVFLVDSIPK NAAGKILRKD LAKIALRRIS SKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.