CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

cytosol 1
plastid 3
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012144_P001	Maize	plastid	67.57	91.46
TraesCS3A01G394300.1	Wheat	peroxisome	85.05	84.29
TraesCS3D01G388100.1	Wheat	peroxisome	85.23	84.16
TraesCS3B01G426300.1	Wheat	peroxisome	85.05	83.99
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	85.41	80.89
Os01t0901500-01	Rice	plastid	64.14	80.54
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	80.54	80.11
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	78.74	78.04
CDY45731	Canola	peroxisome	20.0	72.08
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	76.76	71.48
GSMUA_Achr5P25570_001	Banana	peroxisome	61.08	61.41
CDY71478	Canola	vacuole	49.19	59.48
CDY45730	Canola	vacuole	49.01	59.26
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	56.58	57.09
Bra029229.1-P	Field mustard	peroxisome	54.77	54.38
AT5G63380.1	Thale cress	peroxisome	54.95	54.27
Solyc03g111170.2.1	Tomato	nucleus	53.69	53.99
PGSC0003DMT400039281	Potato	peroxisome	53.69	53.99
KRH63739	Soybean	peroxisome, plastid	55.86	53.45
VIT_14s0171g00300.t01	Wine grape	peroxisome	51.53	52.67
KRH54211	Soybean	peroxisome	56.04	52.09
EER98656	Sorghum	peroxisome, plastid	50.99	50.99
VIT_14s0171g00290.t01	Wine grape	peroxisome	49.55	50.83
EER97853	Sorghum	peroxisome, plastid	49.91	50.09
KRG94318	Soybean	peroxisome, plastid	48.29	49.54
KRH57646	Soybean	peroxisome, plastid	48.29	48.55
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	47.39	47.82
KXG38162	Sorghum	peroxisome	47.75	47.07
EER95569	Sorghum	peroxisome	45.95	46.11
OQU88316	Sorghum	peroxisome, plastid	48.65	45.15
OQU91476	Sorghum	peroxisome	41.98	41.83
KXG40154	Sorghum	peroxisome	41.08	41.23
KXG38810	Sorghum	peroxisome	39.28	38.05
EES15085	Sorghum	peroxisome	34.59	34.78
EER90150	Sorghum	peroxisome	34.23	34.11
EES04623	Sorghum	peroxisome	33.69	33.69
KRH57649	Soybean	plastid	16.94	33.57
EES13602	Sorghum	peroxisome	34.23	33.27
EER99996	Sorghum	plastid	36.22	33.22
EES05680	Sorghum	peroxisome	33.33	32.69
KRG94321	Soybean	cytosol, golgi, peroxisome	17.66	31.11
KXG26308	Sorghum	peroxisome	22.52	22.94

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EntrezGene:8056122	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	UniProt:C5XFF3	EnsemblPlants:EES01913	ProteinID:EES01913	ProteinID:EES01913.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF251	EnsemblPlantsGene:SORBI_3003G391600	SUPFAM:SSF56801	unigene:Sbi.6680	UniParc:UPI0001A8509B
RefSeq:XP_002456793.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:70281068..70286782

Molecular Weight (calculated)

58759.3 Da

IEP (calculated)

6.523

GRAVY (calculated)

0.164

Length

555 amino acids

Sequence
(BLAST)

001: MAEPCPPGGI DPRSGFCAAT RTFHSLRPST ELPPDSLPAT AAAYAFSSLS SPLPDRPALV DAATGIAVSY PSFLAAVRSL AGGLWSVLGL RPGDVALVVS
101: PSRIDVPVID FALMSIGAVV SPANPASTAD EYAHMVALSR PVVALAAPEV AAKLPRNLRC VVIGSDEYKG LSSAGGAAPP PPVAVKQSDT AAVLYSSGTT
201: GRVKAAAVSH RNLIALLCAH RDIRAMVDKE AAEAGEEPPP PTVTLFPLPL FHVFGFMMML RSVAMGETAV LMDRFDFVAA LRAIERYRVT LLPAAPPVLV
301: AMIKSEEARR RDLSSLIVIG IGGAPLGREV AERFAAIFPN IELVQGYGLT ESSGSVASTV GPDECKAYGS VGKLASHLEA KIVDPSTGEA LGPGQRGELW
401: VRGPVVMKGY VGDDEATAAT VDSEGWLKTG DLCYFNEDGF LYIVDRLKEL IKYKGYQVPP AELEHILNSH PDIMDAAVIP YPDEDVGQLP MAFIVRKPGS
501: NLTKQQVMDF VAKQVAPYKK VRRVAFVSAI PKSPAGKILR RELVEQAVSM VTSKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.