Factsheet for TraesCS3D01G388100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G426300.1	Wheat	peroxisome	97.86	97.86
TraesCS3A01G394300.1	Wheat	peroxisome	97.33	97.68
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	96.62	92.66
EES01913	Sorghum	peroxisome, plastid	84.16	85.23
Os01t0901500-01	Rice	plastid	66.01	83.94
Zm00001d012144_P001	Maize	plastid	59.25	81.22
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	83.81	79.03
CDY45731	Canola	peroxisome	19.57	71.43
GSMUA_Achr5P25570_001	Banana	peroxisome	60.32	61.41
CDY71478	Canola	vacuole	48.58	59.48
CDY45730	Canola	vacuole	47.86	58.61
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	56.05	57.27
Bra029229.1-P	Field mustard	peroxisome	54.8	55.1
KRH63739	Soybean	peroxisome, plastid	56.23	54.48
PGSC0003DMT400039281	Potato	peroxisome	53.38	54.35
Solyc03g111170.2.1	Tomato	nucleus	53.38	54.35
AT5G63380.1	Thale cress	peroxisome	54.09	54.09
KRH54211	Soybean	peroxisome	56.41	53.1
VIT_14s0171g00300.t01	Wine grape	peroxisome	50.89	52.67
TraesCS4D01G074700.1	Wheat	peroxisome	50.18	51.65
TraesCS4D01G074600.1	Wheat	peroxisome	50.53	51.54
VIT_14s0171g00290.t01	Wine grape	peroxisome	49.11	51.02
TraesCS4D01G074500.1	Wheat	plastid	49.11	50.83
TraesCS3D01G468000.1	Wheat	peroxisome	50.0	50.72
TraesCS5D01G561500.1	Wheat	peroxisome	49.47	50.09
KRH57646	Soybean	peroxisome, plastid	48.93	49.82
KRG94318	Soybean	peroxisome, plastid	47.51	49.35
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	47.33	48.36
TraesCS4D01G323500.1	Wheat	plastid	46.44	47.37
TraesCS4D01G268400.1	Wheat	peroxisome	40.39	41.5
TraesCS1D01G200200.1	Wheat	peroxisome	41.1	40.67
TraesCS2D01G150400.1	Wheat	peroxisome	34.7	36.11
KRH57649	Soybean	plastid	17.62	35.36
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	34.34	33.98
TraesCS7D01G483400.1	Wheat	peroxisome	33.45	33.57
TraesCS6D01G141700.1	Wheat	peroxisome	32.38	33.15
KRG94321	Soybean	cytosol, golgi, peroxisome	18.33	32.7
TraesCS2D01G272200.1	Wheat	plastid	35.41	32.15

Protein Annotations

EnsemblPlants:TraesCS3D01G388100.1	EnsemblPlantsGene:TraesCS3D01G388100	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:503046573..503050215

Molecular Weight (calculated)

58985.2 Da

IEP (calculated)

7.359

GRAVY (calculated)

0.164

Length

562 amino acids

Sequence
(BLAST)

001: MANTAAAAAA TAEGIDPRSG YCAATRTFHS LRSASTGALP PESLPVTAAA YAFSLLASPL PDRPALVDAA TGIAVSYPSF LAAVRSLAGG LWSSLGLRPG
101: DVALVVAPSR LDVPVLHFAL MSIGAVVSPA NPASTPEEYA HQVALSRPVV AFAAPEVAAK LPGHLRCVVL GSDAYTRLAS AGAGSAPPPV AVKQSDTAAV
201: LYSSGTTGRV KAVAITHRNL IALICAHAEN RERVAAEATE AGEEPPPPAV TLLPLPLFHV FGFMMVLRSV SMGETAVLME RFDFGAALRA IERYRATLLP
301: AAPPVLVAMI KSEEARRRDL SSLLVIGVGG APLGREVAER FVAVFPNVQI VQGYGLTESS GSVASTVGPE ESKAYGSVGK LASHLQAKIV DPSTGEALGP
401: GQRGELWVRG PLVMKGYVGD DKATAETVDS EGWLKTGDLC YFNEDGFLYI VDRLKELIKY KGYQVPPAEL EHILQSHPEI ADAAVIGYPD EDAGQLPMAF
501: IVRQPGSNLT GQQVMDYVAK HVAPYKKVRR VAFVNAITKS PAGKILRREL VQQAMSMGAS KL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.