Factsheet for HORVU3Hr1G089000.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G388100.1	Wheat	peroxisome	92.66	96.62
TraesCS3B01G426300.1	Wheat	peroxisome	92.49	96.44
TraesCS3A01G394300.1	Wheat	peroxisome	91.64	95.89
EES01913	Sorghum	peroxisome, plastid	80.89	85.41
Os01t0901500-01	Rice	plastid	62.63	83.03
Zm00001d012144_P001	Maize	plastid	56.66	80.98
CDY45731	Canola	peroxisome	18.43	70.13
GSMUA_Achr5P25570_001	Banana	peroxisome	58.19	61.78
CDY71478	Canola	vacuole	46.25	59.04
CDY45730	Canola	vacuole	45.56	58.17
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	53.92	57.45
KRH63739	Soybean	peroxisome, plastid	53.92	54.48
Bra029229.1-P	Field mustard	peroxisome	51.88	54.38
Solyc03g111170.2.1	Tomato	nucleus	51.19	54.35
PGSC0003DMT400039281	Potato	peroxisome	51.19	54.35
AT5G63380.1	Thale cress	peroxisome	51.54	53.74
KRH54211	Soybean	peroxisome	53.92	52.93
VIT_14s0171g00300.t01	Wine grape	peroxisome	48.63	52.49
HORVU4Hr1G012660.1	Barley	peroxisome	48.12	52.13
HORVU4Hr1G012680.8	Barley	peroxisome	48.81	51.35
VIT_14s0171g00290.t01	Wine grape	peroxisome	47.1	51.02
KRH57646	Soybean	peroxisome, plastid	47.1	50.0
KRG94318	Soybean	peroxisome, plastid	46.08	49.91
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	19.28	49.56
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	48.63	49.14
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	45.05	48.0
HORVU4Hr1G081940.3	Barley	peroxisome	44.2	47.09
HORVU4Hr1G012630.3	Barley	peroxisome	45.9	46.86
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	29.18	37.92
HORVU1Hr1G051190.2	Barley	peroxisome	40.1	36.95
KRH57649	Soybean	plastid	17.06	35.71
HORVU0Hr1G018190.2	Barley	peroxisome	32.59	33.57
HORVU6Hr1G030390.2	Barley	peroxisome	31.23	33.09
KRG94321	Soybean	cytosol, golgi, peroxisome	17.58	32.7
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	32.25	32.03
HORVU4Hr1G072150.1	Barley	peroxisome	25.26	26.57
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	23.55	25.27

Protein Annotations

EMBL:AK353658	EnsemblPlants:HORVU3Hr1G089000.2	EnsemblPlantsGene:HORVU3Hr1G089000	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg
SUPFAM:SSF56801	UniParc:UPI0002004471	UniProt:F2CPV6	MapMan:35.1	:	:

Description

Predicted protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F2CPV6]

Coordinates

chrchr3H:-:626852015..626856107

Molecular Weight (calculated)

61476.3 Da

IEP (calculated)

8.294

GRAVY (calculated)

0.125

Length

586 amino acids

Sequence
(BLAST)

001: VSPPPSCPAP NPPPPPSAAI PRPTHAQMAE PAAAAAEGID PRSGYCAATR TFHSLRSASA GALPPEALPV TAAAYAFSLL ASPLPDRPAL VDAATGIAVS
101: YPSFLAAVRS LAGGLWSSLG LRPGDVALVV APSRLDVPVL HFALMSIGAV VSPANPASTP EEYAHQVALS RPVVAFAAPE VAAKLPAHLR RVVLGSDAYR
201: GLSSAGARSA PPPVAVKQSD TAAVLYSSGT TGRVKAVAIT HRNLIALICA HAENRERVAA EATEAGEEPP PPAVTLLPLP LFHVFGFMMV LRSVSMGETA
301: VLMERFDFGA ALRAIERYRA TLLPAAPPVL VAMIKSEEAR RRDLSSLLVI GVGGAPLGRE VAERFVAVFP NVQIVQGYGL TESSGSVAST VGPEESKAYG
401: SVGKLASHLQ AKIVDPSTGE ALGPGQRGEL WIRGPLVMKG YVGDDKATAE TVDSEGWLKT GDLCYFNEDG FLYIVDRLKE LIKYKGYQVP PAELEHILQS
501: HPEIADAAVI GYPDEDVGQL PMAFIVRQPG SSLTGKQVMD YVAKHVAPYK KVRRVAFVAA IPKSPAGKIL RRELVQQAMS MGASKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.