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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plastid
BaCelLo:plastid
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65966 Canola peroxisome 66.76 69.97
Bra031265.1-P Field mustard peroxisome 90.54 59.93
CDY19570 Canola peroxisome 89.73 59.39
CDY06431 Canola peroxisome 77.84 52.08
CDY68920 Canola peroxisome 77.3 51.72
CDX82208 Canola peroxisome 76.49 49.48
CDY32416 Canola peroxisome 75.95 48.95
CDY48875 Canola mitochondrion, plastid, vacuole 47.3 39.41
CDX87831 Canola peroxisome 51.89 34.85
CDY19568 Canola peroxisome 51.89 34.78
CDY43921 Canola peroxisome 51.62 34.66
TraesCS2D01G150400.1 Wheat peroxisome 45.95 31.48
TraesCS2B01G171200.1 Wheat peroxisome 45.68 31.3
KRH02886 Soybean peroxisome, plastid 47.57 31.21
TraesCS2A01G145800.1 Wheat peroxisome 45.41 31.0
Os08t0448000-01 Rice peroxisome 44.86 30.8
EES15085 Sorghum peroxisome 45.95 30.8
KRH19011 Soybean peroxisome 46.76 30.78
GSMUA_AchrUn_... Banana peroxisome 42.97 30.7
Zm00001d032103_P001 Maize peroxisome 45.95 30.63
GSMUA_Achr1P23450_001 Banana peroxisome 42.7 30.38
GSMUA_Achr4P05820_001 Banana peroxisome 42.7 30.27
GSMUA_Achr4P12590_001 Banana peroxisome 39.73 30.06
GSMUA_Achr7P05070_001 Banana peroxisome 39.19 29.41
EER90150 Sorghum peroxisome 43.24 28.73
CDY07442 Canola peroxisome 42.97 28.6
CDY39293 Canola peroxisome 42.7 28.37
TraesCS7A01G496200.1 Wheat peroxisome 42.7 28.37
Os06t0656500-01 Rice peroxisome 42.7 28.26
TraesCS7D01G483400.1 Wheat peroxisome 42.7 28.21
EES04623 Sorghum peroxisome 42.16 28.11
TraesCS6B01G179900.2 Wheat peroxisome 41.62 28.1
TraesCS6D01G141700.1 Wheat peroxisome 41.35 27.87
HORVU6Hr1G030390.2 Barley peroxisome 41.62 27.85
TraesCS6A01G151700.1 Wheat peroxisome 41.08 27.84
Os02t0177600-01 Rice plasma membrane 41.62 27.8
Os08t0245200-01 Rice extracellular 41.62 27.3
EES13602 Sorghum peroxisome 41.89 27.15
HORVU7Hr1G111130.3 Barley peroxisome, plastid 43.24 27.12
Zm00001d050224_P002 Maize peroxisome 40.0 26.43
Zm00001d015459_P003 Maize peroxisome 40.81 25.72
Zm00001d046915_P001 Maize extracellular 43.51 25.2
GSMUA_Achr9P22840_001 Banana peroxisome 23.51 22.77
CDY46375 Canola peroxisome 31.35 21.4
CDY39155 Canola peroxisome 30.0 20.48
CDY01370 Canola peroxisome, plastid 30.27 20.36
CDY31883 Canola plastid 28.38 19.34
CDY33628 Canola plastid 28.65 19.2
CDX96633 Canola plastid 28.65 19.17
CDY39153 Canola peroxisome 27.84 19.11
CDY33631 Canola plastid 28.38 18.99
CDX96637 Canola plastid 28.38 18.99
CDY46376 Canola peroxisome 27.57 18.92
CDY01369 Canola plastid 27.3 18.6
CDY31474 Canola peroxisome 28.92 18.45
CDX96638 Canola peroxisome 25.41 17.84
CDY33627 Canola peroxisome 26.76 17.77
CDY39816 Canola peroxisome 25.41 17.41
CDY31472 Canola peroxisome 24.05 17.32
CDX96636 Canola golgi, vacuole 17.84 17.23
CDX78914 Canola peroxisome, plastid 26.49 17.07
CDY45730 Canola vacuole 21.08 16.99
CDY71478 Canola vacuole 20.81 16.78
CDY29527 Canola peroxisome 23.78 16.6
CDY33629 Canola golgi, vacuole 18.92 16.55
CDX99401 Canola peroxisome 21.89 12.13
CDY06435 Canola vacuole 14.32 11.91
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 14.86 10.07
CDY03253 Canola peroxisome 25.95 6.22
CDY32418 Canola peroxisome 2.43 4.92
CDY53918 Canola peroxisome 1.89 3.74
CDY45731 Canola peroxisome 1.35 3.25
CDX78913 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY71190EnsemblPlantsGene:GSBRNA2T00011963001Gene3D:3.40.50.12780GO:A0A078JXM3GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigPANTHER:PTHR24096PANTHER:PTHR24096:SF207
PFAM:PF00501ProteinID:CDY71190ProteinID:CDY71190.1ScanProsite:PS00455SEG:segSUPFAM:SSF56801
UniParc:UPI0004EB1BC1UniProt:A0A078JXM3MapMan:35.1:::
Description
BnaUnng04240DBnaUnng04240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXM3]
Coordinates
chrLK044857:+:135..1423
Molecular Weight (calculated)
40284.8 Da
IEP (calculated)
4.750
GRAVY (calculated)
0.077
Length
370 amino acids
Sequence
(BLAST)
001: MALLRQQETL SLAKNQEPSQ DFIFRSKLPD ISIPNHLSLT DYLFQKFSGD GGGDSTATCL IDGATGRIFT YADVQITLRS IAAGLYRLGI RHGDTVMLLL
101: PNSPEFALSL LGAAYLGAIS TPANPLFTQP EIAKQAQASG AKMIITKPCY VDKLTNLENV LIVCVHDGDD DVPLPDGCVS FTELTQADET ELPKPEISPD
201: DTVLMPYSSG TTGLPKGVMI SHKGVVASTA QKVDGENPHL NFTGDDVMIC FLPMFHTYAH NLLMLSAMRA GAAFLILPRF ELNMVMEMIQ KYKVTVVPMA
301: PPVVLAFVNS QETERYDLSS VRMMFSGSGA LTKELEDAVR LKLPNAIFGQ ITYDTGHVVV MSRCEDLSPQ
Best Arabidopsis Sequence Match ( AT1G51680.2 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.