CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46376	Canola	peroxisome	97.03	97.03
Bra029560.1-P	Field mustard	peroxisome	87.38	88.2
CDY39155	Canola	peroxisome	82.75	82.29
CDY46375	Canola	peroxisome	82.75	82.29
KRH25085	Soybean	peroxisome	38.59	68.2
PGSC0003DMT400020978	Potato	peroxisome	67.9	67.65
Solyc11g069050.1.1	Tomato	peroxisome	66.42	66.54
VIT_06s0061g00450.t01	Wine grape	peroxisome	65.12	64.52
KRH30593	Soybean	peroxisome	66.05	63.8
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	26.53	62.72
GSMUA_Achr5P19650_001	Banana	peroxisome	53.06	58.85
GSMUA_Achr8P14210_001	Banana	peroxisome	53.99	58.67
KXG40154	Sorghum	peroxisome	56.96	55.52
TraesCS4D01G268400.1	Wheat	peroxisome	56.22	55.39
TraesCS4A01G036200.1	Wheat	peroxisome	55.66	54.64
Zm00001d027711_P003	Maize	extracellular	56.03	54.41
Os03t0152400-01	Rice	plasma membrane	55.47	54.17
TraesCS4B01G269200.1	Wheat	peroxisome	55.47	53.87
Zm00001d033055_P001	Maize	peroxisome	54.92	53.82
OQU91476	Sorghum	peroxisome	54.73	52.96
CDY45731	Canola	peroxisome	14.66	51.3
CDY53918	Canola	peroxisome	16.33	47.06
CDY32418	Canola	peroxisome	15.21	44.81
CDY45730	Canola	vacuole	36.36	42.7
CDX96636	Canola	golgi, vacuole	30.06	42.3
CDY71478	Canola	vacuole	35.81	42.05
CDX96638	Canola	peroxisome	40.26	41.18
CDY31472	Canola	peroxisome	38.96	40.86
CDY33631	Canola	plastid	41.37	40.33
CDY33628	Canola	plastid	41.19	40.22
CDY29527	Canola	peroxisome	39.52	40.19
CDY31883	Canola	plastid	40.45	40.15
CDX96633	Canola	plastid	41.19	40.14
CDX96637	Canola	plastid	41.0	39.96
CDY07442	Canola	peroxisome	41.19	39.93
CDY01370	Canola	peroxisome, plastid	40.63	39.82
CDY01369	Canola	plastid	40.07	39.78
CDY39293	Canola	peroxisome	40.82	39.5
CDY19568	Canola	peroxisome	39.52	38.59
CDX78914	Canola	peroxisome, plastid	41.0	38.5
CDY43921	Canola	peroxisome	39.15	38.29
CDX87831	Canola	peroxisome	39.15	38.29
CDY33629	Canola	golgi, vacuole	29.87	38.06
CDY33627	Canola	peroxisome	39.15	37.88
CDY68920	Canola	peroxisome	38.03	37.07
CDY06431	Canola	peroxisome	37.66	36.71
CDY48875	Canola	mitochondrion, plastid, vacuole	29.87	36.26
CDY31474	Canola	peroxisome	38.96	36.21
CDX82208	Canola	peroxisome	38.22	36.01
CDY32416	Canola	peroxisome	37.66	35.37
CDY19570	Canola	peroxisome	35.99	34.7
CDY39816	Canola	peroxisome	34.69	34.63
HORVU4Hr1G072150.1	Barley	peroxisome	33.21	32.14
CDX99401	Canola	peroxisome	36.73	29.64
CDY06435	Canola	vacuole	23.93	28.99
CDY65966	Canola	peroxisome	18.92	28.9
CDY71190	Canola	peroxisome	19.11	27.84
CDY03253	Canola	peroxisome	35.06	12.25
CDX78913	Canola	cytosol	0.19	0.56

Protein Annotations

EnsemblPlants:CDY39153	EnsemblPlantsGene:GSBRNA2T00067333001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:A0A078HQV5	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF302	PFAM:PF00501	PFAM:PF13193	ProteinID:CDY39153	ProteinID:CDY39153.1
ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0004EE0879	UniProt:A0A078HQV5	MapMan:35.1	:

Description

BnaC09g21910DBnaC09g21910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQV5]

Coordinates

chrLK032442:+:2437..5096

Molecular Weight (calculated)

59221.8 Da

IEP (calculated)

6.866

GRAVY (calculated)

-0.033

Length

539 amino acids

Sequence
(BLAST)

001: MENSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFGNTSSY PTKPALVDSD TGDSLSFSQL KAAVSRLAHG LLRLGIRKND VVMIFAPNSH RFPLCFLAVT
101: AIGGVFTTVN PSYTVNEVSK QVKDCNPKII FSVQELLDKV KTFDLPIVLL GQSDLDSSSK ILPLNNVMEL SEPVSDLPCV DVKQSDTAAL LYSSGTTGMS
201: KGVELTHGNF IATALMVTMD QDLMGEYHGV FLCFLPMFHV FGLSVVTYAQ LQRGNAVVSM AKFDLERLLK NIEKYRVTQL WVVPPVFLAL AKQSIVKKYD
301: LSSLKYIGSG AAPLGKDSME ECARNIPNVV LMQGYAMTET CGIVSMEDPR RGKRNSGSAG MLASGIEAQV VSVESGKPQP PNQQGEIWVR GPNMMKGYLN
401: NPEANKETID ENGWVHTGDL GYINEDGNLF IVERLKELIK CNGFQVAPAE LEGLLVSHPE LLDAIVIPFP DVYAGEVPIA FVVRSPNTTI TEEDIQKFIA
501: EQVAPYKRLR RVSFVSSVPK SLAGKLLRRE LREQVRSKM

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.