Factsheet for Bra029560.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46376	Canola	peroxisome	90.45	89.61
CDY39153	Canola	peroxisome	88.2	87.38
Bra029561.1-P	Field mustard	peroxisome	74.53	73.43
PGSC0003DMT400020978	Potato	peroxisome	61.8	61.0
Solyc11g069050.1.1	Tomato	peroxisome	60.49	60.04
KRH30593	Soybean	peroxisome	60.86	58.24
KRH25085	Soybean	peroxisome	32.77	57.38
VIT_06s0061g00450.t01	Wine grape	peroxisome	58.24	57.17
GSMUA_Achr5P19650_001	Banana	peroxisome	46.63	51.23
GSMUA_Achr8P14210_001	Banana	peroxisome	46.63	50.2
KXG40154	Sorghum	peroxisome	50.94	49.19
TraesCS4D01G268400.1	Wheat	peroxisome	50.0	48.81
Os03t0152400-01	Rice	plasma membrane	49.81	48.19
Zm00001d027711_P003	Maize	extracellular	50.0	48.11
TraesCS4A01G036200.1	Wheat	peroxisome	49.25	47.91
TraesCS4B01G269200.1	Wheat	peroxisome	49.25	47.39
Zm00001d033055_P001	Maize	peroxisome	48.31	46.91
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	19.85	46.49
OQU91476	Sorghum	peroxisome	48.13	46.14
Bra004109.1-P	Field mustard	peroxisome	36.89	35.43
Bra016466.1-P	Field mustard	peroxisome	35.77	34.85
Bra016465.1-P	Field mustard	plastid	32.02	34.83
Bra029229.1-P	Field mustard	peroxisome	35.96	34.35
Bra012232.1-P	Field mustard	peroxisome, plastid	35.02	34.06
Bra030429.1-P	Field mustard	peroxisome	35.21	34.06
Bra012233.1-P	Field mustard	plastid	34.46	33.95
Bra031266.1-P	Field mustard	peroxisome	35.02	33.88
Bra013369.1-P	Field mustard	peroxisome, plastid	36.33	33.86
Bra016464.1-P	Field mustard	plastid	35.21	33.51
Bra016463.1-P	Field mustard	plastid	34.64	33.45
Bra025822.1-P	Field mustard	peroxisome	33.71	33.15
Bra031263.1-P	Field mustard	peroxisome	33.15	32.01
Bra001819.1-P	Field mustard	peroxisome	34.27	31.88
Bra001820.1-P	Field mustard	peroxisome	34.08	31.11
Bra031265.1-P	Field mustard	peroxisome	32.02	30.59
HORVU4Hr1G072150.1	Barley	peroxisome	26.78	25.67
Bra036646.1-P	Field mustard	peroxisome	29.96	10.82

Protein Annotations

EnsemblPlants:Bra029560.1	EnsemblPlants:Bra029560.1-P	EnsemblPlantsGene:Bra029560	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096	PANTHER:PTHR24096:SF302
PFAM:PF00501	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0002542611	UniProt:M4EL93	MapMan:35.1

Description

AT4G05160 (E=1e-216) | 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative

Coordinates

chrA09:-:16992846..16996577

Molecular Weight (calculated)

58832.5 Da

IEP (calculated)

5.244

GRAVY (calculated)

-0.106

Length

534 amino acids

Sequence
(BLAST)

001: MENSGYGRDG IYRSLRPTLV LPEDPNTSLV SFLFANTSSC PSKPALVDSD TGDSLSFSQL KAAVSRLAHG FLRLGIRKND VVMIFAPNSH QFPLCFLAVT
101: AIGGVFTTVN PSYTVNEVSK QVKDCNPKII ISVQELLDKV NTFDLPIVLL GQSDLDSSSK ILTLNNVMDL SEPVSDLPCV DVKQSDTAAL LYSSGTTGMS
201: KGVELTHGNF IATALMVTMD QDLMGEYHGV FLCFLPMFHV FGLSVVTYAQ LQRGNAVVSM AKFDLERLLK NIEKYRVTQL WVVPPVFLAL AKQSIVKKYD
301: LSSLKYIGSG AAPLGKDSME ECARNIPNVV LMQGYAMTET CGIVSMEDPR RGKRNSGSAG TLASGIEAQV VSVESGKPQP PNQQGEIWVR GPNMMKGYLN
401: NPEATKETID ENGWVHTGDL GYFNEDGNLF IVERLKELIK CNGFRGEARF PDVYAGEVPI AFVVRSPNTT ITEEDIQKFI AKQRKDLDFR ESVRRLLPEE
501: INGTIDEFLH RFTGFSSAYD SRSSGFDSGN WWLV

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.