CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
plastid 1
peroxisome 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	47.21	63.16
KRH30593	Soybean	peroxisome	94.43	51.61
KRH22842	Soybean	peroxisome, plastid	77.7	43.89
PGSC0003DMT400020978	Potato	peroxisome	76.07	42.88
Solyc11g069050.1.1	Tomato	peroxisome	75.08	42.57
GSMUA_Achr5P19650_001	Banana	peroxisome	67.21	42.18
AT4G05160.1	Thale cress	peroxisome	73.11	40.99
CDY46375	Canola	peroxisome	72.79	40.96
Bra029561.1-P	Field mustard	peroxisome	72.79	40.96
VIT_06s0061g00450.t01	Wine grape	peroxisome	72.79	40.81
CDY39155	Canola	peroxisome	72.46	40.77
GSMUA_Achr8P14210_001	Banana	peroxisome	64.26	39.52
CDY46376	Canola	peroxisome	69.18	39.15
CDY39153	Canola	peroxisome	68.2	38.59
TraesCS4A01G036200.1	Wheat	peroxisome	68.52	38.07
KXG40154	Sorghum	peroxisome	68.85	37.97
TraesCS4D01G268400.1	Wheat	peroxisome	67.54	37.66
TraesCS4B01G269200.1	Wheat	peroxisome	68.52	37.66
Zm00001d033055_P001	Maize	peroxisome	67.21	37.27
Os03t0152400-01	Rice	plasma membrane	67.21	37.14
Zm00001d027711_P003	Maize	extracellular	67.54	37.12
OQU91476	Sorghum	peroxisome	67.54	36.98
KRH63132	Soybean	vacuole	32.79	35.09
KRG92118	Soybean	peroxisome	17.38	33.12
Bra029560.1-P	Field mustard	peroxisome	57.38	32.77
KRG94318	Soybean	peroxisome, plastid	50.16	28.28
HORVU4Hr1G072150.1	Barley	peroxisome	51.15	28.01
KRH57646	Soybean	peroxisome, plastid	47.87	26.45
KRH17509	Soybean	peroxisome, plastid	46.89	26.05
KRH02885	Soybean	peroxisome	45.25	25.75
KRH63739	Soybean	peroxisome, plastid	48.85	25.69
KRH02884	Soybean	peroxisome	45.9	25.59
KRH77759	Soybean	peroxisome	46.23	25.41
KRG92119	Soybean	peroxisome	47.21	25.31
KRH34672	Soybean	peroxisome	46.89	25.09
KRH23700	Soybean	peroxisome	44.92	25.05
KRH54211	Soybean	peroxisome	48.85	24.96
KRH09616	Soybean	mitochondrion, peroxisome	43.93	24.91
KRH29003	Soybean	plastid	45.9	24.82
KRH34673	Soybean	peroxisome	46.23	24.74
KRH27719	Soybean	peroxisome	42.95	24.3
KRG98485	Soybean	peroxisome	43.93	24.23
KRH74284	Soybean	peroxisome	43.61	24.05
KRH46374	Soybean	peroxisome	43.61	24.05
KRH02886	Soybean	peroxisome, plastid	43.61	23.58
KRH19011	Soybean	peroxisome	39.02	21.17
KRH39635	Soybean	cytosol, golgi, peroxisome	33.11	20.28
KRG94321	Soybean	cytosol, golgi, peroxisome	11.15	10.79
KRH57649	Soybean	plastid	9.51	10.36

Protein Annotations

EMBL:ACUP02007202	EnsemblPlants:KRH25085	EnsemblPlantsGene:GLYMA_12G079600	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF310	PFAM:PF00501	PFAM:PF13193	ProteinID:KRH25085	ProteinID:KRH25085.1
ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0002959CCB	UniProt:K7LTN2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr12:-:6236413..6239887

Molecular Weight (calculated)

33150.5 Da

IEP (calculated)

7.060

GRAVY (calculated)

0.096

Length

305 amino acids

Sequence
(BLAST)

001: MEMAGPVTQG DTAALLYSSG TTGLSKGVVL THRNFIAASV MIGMDDDIAG EQNDVYLCVL PMFHAFGLAV VTYAALQRGS AVVVMGRFEL KALLRAVEKH
101: WVTKLWLVPP ILLALAKQSV GYGMTETCGI VSLENPRVGV RHTGSTGTLG SGVEAQIVSV DTQKPLPPRQ LGEIWVRGPN MMQGDLGYFD EDGQLYVVDR
201: IKELIKYKGF QVAPAELEGL LVSHPEILEA VVVPYPDDEA GEVPIAYVVR SPNSSLTEEE IQKFIAKQVA PFKKLQRVTF INSVPKTASG KILRRELTAK
301: ARSKI

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.