Factsheet for Bra001820.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48875	Canola	mitochondrion, plastid, vacuole	71.62	94.37
CDY65966	Canola	peroxisome	54.19	89.8
Bra001819.1-P	Field mustard	peroxisome	81.71	83.28
Bra031265.1-P	Field mustard	peroxisome	79.15	82.83
Bra031263.1-P	Field mustard	peroxisome	76.24	80.65
Bra030429.1-P	Field mustard	peroxisome	60.0	63.59
Bra031266.1-P	Field mustard	peroxisome	59.66	63.22
GSMUA_Achr4P12590_001	Banana	peroxisome	52.31	62.58
GSMUA_Achr7P05070_001	Banana	peroxisome	50.77	60.24
GSMUA_AchrUn_...	Banana	peroxisome	53.33	60.23
GSMUA_Achr1P23450_001	Banana	peroxisome	53.5	60.19
GSMUA_Achr4P05820_001	Banana	peroxisome	53.5	59.96
GSMUA_Achr9P22840_001	Banana	peroxisome	38.97	59.69
KRH02886	Soybean	peroxisome, plastid	56.41	58.51
TraesCS2B01G171200.1	Wheat	peroxisome	52.99	57.41
TraesCS2D01G150400.1	Wheat	peroxisome	52.82	57.22
Os08t0448000-01	Rice	peroxisome	52.65	57.14
EES15085	Sorghum	peroxisome	53.68	56.88
TraesCS2A01G145800.1	Wheat	peroxisome	52.65	56.83
Zm00001d032103_P001	Maize	peroxisome	53.33	56.22
TraesCS6B01G179900.2	Wheat	peroxisome	52.65	56.2
EER90150	Sorghum	peroxisome	53.5	56.19
TraesCS6A01G151700.1	Wheat	peroxisome	52.31	56.04
Os02t0177600-01	Rice	plasma membrane	52.99	55.96
TraesCS6D01G141700.1	Wheat	peroxisome	52.48	55.92
HORVU6Hr1G030390.2	Barley	peroxisome	52.65	55.7
EES04623	Sorghum	peroxisome	52.31	55.14
Os06t0656500-01	Rice	peroxisome	52.48	54.92
TraesCS7A01G496200.1	Wheat	peroxisome	51.97	54.58
TraesCS7D01G483400.1	Wheat	peroxisome	51.97	54.29
KRH19011	Soybean	peroxisome	51.62	53.74
Bra004109.1-P	Field mustard	peroxisome	50.77	53.42
Os08t0245200-01	Rice	extracellular	50.77	52.66
Zm00001d050224_P002	Maize	peroxisome	49.74	51.96
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	52.31	51.86
EES13602	Sorghum	peroxisome	50.43	51.66
Zm00001d015459_P003	Maize	peroxisome	51.62	51.45
Zm00001d046915_P001	Maize	extracellular	53.33	48.83
Bra029561.1-P	Field mustard	peroxisome	37.78	40.77
Bra016463.1-P	Field mustard	plastid	35.21	37.25
Bra016466.1-P	Field mustard	peroxisome	34.19	36.5
Bra012232.1-P	Field mustard	peroxisome, plastid	34.02	36.25
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	33.68	36.08
Bra012233.1-P	Field mustard	plastid	32.99	35.61
Bra013369.1-P	Field mustard	peroxisome, plastid	34.02	34.73
Bra025822.1-P	Field mustard	peroxisome	32.14	34.62
Bra016464.1-P	Field mustard	plastid	33.16	34.58
Bra029560.1-P	Field mustard	peroxisome	31.11	34.08
Bra029229.1-P	Field mustard	peroxisome	32.31	33.81
Bra016465.1-P	Field mustard	plastid	28.03	33.4
Bra036646.1-P	Field mustard	peroxisome	32.99	13.05

Protein Annotations

EnsemblPlants:Bra001820.1	EnsemblPlants:Bra001820.1-P	EnsemblPlantsGene:Bra001820	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF207	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg
SUPFAM:SSF56801	UniParc:UPI0002540635	UniProt:M4CC90	MapMan:35.1	:	:

Description

AT3G21230 (E=2e-132) 4CL5 | 4CL5 (4-coumarate:CoA ligase 5); 4-coumarate-CoA ligase

Coordinates

chrA03:-:18655088..18658049

Molecular Weight (calculated)

64127.5 Da

IEP (calculated)

5.178

GRAVY (calculated)

0.040

Length

585 amino acids

Sequence
(BLAST)

001: MLSRQQETLF LTKKLDQEPR QDFIFRSKLP DIFIPNHLPL TDYVFQRFSG NGDGDSTATC LIDSATGRIF TYADVQINSQ RVAVSIHRLG IRQRDTVMLL
101: LPNSPEFAFS FLAVAYLGAV TTTANPLYTQ AEIARQANAS NAKMIITKQC YVDKLINFQN DGVLIVCVDD ENGTVALADG CVSFTELTQA DETELPKPEI
201: SPDDTVAIPY SSGTTGLPKG VMITHKSLVT SIAQKVEGEN PNLNFTGDDV IICFLPMFHT YAFNALILSA MRTGAAVLIV PRFELNLVME LIQRYKVTVV
301: PVAPPVVLAE LIQRYKVTVG PVAPPGGFVF VKSQETERYD LSSVRMMISG AATLRKELEE AVLLKFPNAI FGQGYGMTES ATVAKSLSFA KNPFKTKSGA
401: CGTVIRNADM KVVDTITGVS LPRNKAGEIC IRGDQLMKGY LNDPEATATT IDKDGWLHTG DIGYVDDDDE IFIVDRLKEL IKFKGYQVAP AELEALLISH
501: PCIEDAAVVA MKDEVAGEVP VAFVVSSEGS QLTEDDVTSY ICKQVVHYKR VKMVFFTDSI PKAPSGKILR KDLRARLANG LMNLS

Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)

001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK

Arabidopsis Description

4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.