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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 3
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031263.1-P Field mustard peroxisome 99.1 99.1
CDY06431 Canola peroxisome 96.56 96.56
CDY19570 Canola peroxisome 82.46 81.57
CDX82208 Canola peroxisome 83.54 80.77
CDY32416 Canola peroxisome 82.64 79.62
CDY53918 Canola peroxisome 26.4 78.07
CDY71190 Canola peroxisome 51.72 77.3
CDY32418 Canola peroxisome 25.5 77.05
CDY48875 Canola mitochondrion, plastid, vacuole 61.48 76.58
CDY65966 Canola peroxisome 47.38 74.22
GSMUA_Achr4P12590_001 Banana peroxisome 55.15 62.37
CDY19568 Canola peroxisome 61.84 61.96
CDY43921 Canola peroxisome 61.66 61.89
CDX87831 Canola peroxisome 61.66 61.89
GSMUA_Achr9P22840_001 Banana peroxisome 42.5 61.52
GSMUA_Achr7P05070_001 Banana peroxisome 53.71 60.24
GSMUA_Achr4P05820_001 Banana peroxisome 56.6 59.96
GSMUA_AchrUn_... Banana peroxisome 56.06 59.85
GSMUA_Achr1P23450_001 Banana peroxisome 55.7 59.23
TraesCS2B01G171200.1 Wheat peroxisome 56.42 57.78
Os08t0448000-01 Rice peroxisome 56.24 57.7
TraesCS2D01G150400.1 Wheat peroxisome 56.24 57.59
TraesCS2A01G145800.1 Wheat peroxisome 56.42 57.56
KRH02886 Soybean peroxisome, plastid 58.59 57.45
EES15085 Sorghum peroxisome 57.14 57.25
Zm00001d032103_P001 Maize peroxisome 56.96 56.76
Os02t0177600-01 Rice plasma membrane 54.61 54.51
TraesCS6B01G179900.2 Wheat peroxisome 53.89 54.38
TraesCS6A01G151700.1 Wheat peroxisome 53.53 54.21
Os06t0656500-01 Rice peroxisome 54.79 54.2
TraesCS6D01G141700.1 Wheat peroxisome 53.71 54.1
HORVU6Hr1G030390.2 Barley peroxisome 53.89 53.89
EER90150 Sorghum peroxisome 54.25 53.86
KRH19011 Soybean peroxisome 54.61 53.74
EES04623 Sorghum peroxisome 53.89 53.69
CDY07442 Canola peroxisome 53.89 53.6
CDY39293 Canola peroxisome 53.53 53.14
TraesCS7D01G483400.1 Wheat peroxisome 53.71 53.04
TraesCS7A01G496200.1 Wheat peroxisome 53.35 52.96
Os08t0245200-01 Rice extracellular 53.35 52.3
Zm00001d050224_P002 Maize peroxisome 52.08 51.43
EES13602 Sorghum peroxisome 52.98 51.31
HORVU7Hr1G111130.3 Barley peroxisome, plastid 53.89 50.51
Zm00001d015459_P003 Maize peroxisome 52.8 49.74
CDY45731 Canola peroxisome 13.56 48.7
Zm00001d046915_P001 Maize extracellular 54.43 47.1
CDY06435 Canola vacuole 35.44 44.04
CDY46375 Canola peroxisome 39.6 40.41
CDY39155 Canola peroxisome 38.88 39.67
CDY46376 Canola peroxisome 37.43 38.4
CDY45730 Canola vacuole 31.83 38.34
CDY39153 Canola peroxisome 37.07 38.03
CDY71478 Canola vacuole 31.46 37.91
CDX96636 Canola golgi, vacuole 25.68 37.08
CDY31883 Canola plastid 36.35 37.02
CDX96638 Canola peroxisome 34.9 36.62
CDY01370 Canola peroxisome, plastid 36.35 36.55
CDY39816 Canola peroxisome 35.44 36.3
CDY01369 Canola plastid 35.62 36.28
CDX96633 Canola plastid 36.17 36.17
CDY31472 Canola peroxisome 33.45 35.99
CDY33631 Canola plastid 35.99 35.99
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 35.44 35.9
CDY29527 Canola peroxisome 33.63 35.09
CDY31474 Canola peroxisome 36.71 35.0
CDY33628 Canola plastid 34.72 34.78
CDX96637 Canola plastid 34.72 34.72
CDY33627 Canola peroxisome 34.18 33.93
CDX78914 Canola peroxisome, plastid 34.0 32.75
CDY33629 Canola golgi, vacuole 24.95 32.62
CDX99401 Canola peroxisome 31.1 25.75
CDY03253 Canola peroxisome 35.62 12.77
CDX78913 Canola cytosol 0.18 0.56
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3GO:A0A078JR61UniProt:A0A078JR61
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY68920ProteinID:CDY68920ProteinID:CDY68920.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00081020001PFAM:PF00501
PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF207SUPFAM:SSF56801UniParc:UPI0004EEE694
SEG:seg:::::
Description
BnaA05g36600DBnaA05g36600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JR61]
Coordinates
chrLK038264:+:240..4083
Molecular Weight (calculated)
60857.1 Da
IEP (calculated)
8.762
GRAVY (calculated)
0.001
Length
553 amino acids
Sequence
(BLAST)
001: MAFRQQEALS LTKKTDQDFI FRSKLPDISI PNHLPLTQYV FQKFSGGGDG DSTTTCLIDS ATGRTFTYAD VQITLQRIAA GLHRLGIRHG DTVMLLLPNS
101: PEFALSFLAV VHLGAVSTSA NPLFTQTEIA KQAKASAAKM IITKSCYVHK LTNLRQLGVV IVCVDDRNDV VSLADGCVRF TDLTQADEAE LPKPEISPED
201: TVSIPYSSGT TGLPKGVMIS HKGLVTSIAQ KVDGENPNLN FTRDDVIICF LPMFHTFTHS SLMLSAMRTG AAFLILPRFE LNLVMKMVQK YKVTVVPMAP
301: PVVLAFVKSP ETEKYDLSSV RMMLSGSATL KKELEDAVRL KLPNAIFGQS YGMTEAGTVA NSLAFAKHPF KTKSGSCGTV IRNAEMKVVD TITGASLPRN
401: KSGEICIRGH QLMKGYLNDP EATARTIDKY GWLHTGDIGF VDDDDEIFIV DRLKELIKFK GYQVAPAELE ALLIFHPYIE DAAVVPMKDE VADEVPVAFV
501: VRSKGSQLTE DDIKNYVNKQ VVHYKRIKMV FFVKAIPKSA SGKLLRKVLR AKL
Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)
001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK
Arabidopsis Description
4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.