CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
vacuole 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004109.1-P	Field mustard	peroxisome	100.0	100.0
CDY39293	Canola	peroxisome	98.92	98.74
AT1G65060.1	Thale cress	peroxisome	89.39	88.59
VIT_16s0039g02040.t01	Wine grape	peroxisome	69.24	70.26
KRH77759	Soybean	peroxisome	67.81	67.93
GSMUA_Achr11P...	Banana	peroxisome, plastid	63.31	66.04
EES05680	Sorghum	peroxisome	66.73	65.55
Os02t0697400-01	Rice	plasma membrane	66.55	65.03
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	66.19	64.79
TraesCS6B01G294100.1	Wheat	peroxisome	66.55	64.57
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	62.23	64.31
HORVU0Hr1G018190.2	Barley	peroxisome	65.65	64.15
KRH27719	Soybean	peroxisome	62.05	64.01
PGSC0003DMT400008182	Potato	peroxisome	65.47	63.97
TraesCS6A01G266700.1	Wheat	peroxisome	65.83	63.87
Solyc03g097030.2.1	Tomato	peroxisome	65.11	63.51
CDY53918	Canola	peroxisome	21.04	62.57
KRH29003	Soybean	plastid	63.31	62.41
CDX87831	Canola	peroxisome	60.43	60.98
CDY43921	Canola	peroxisome	60.25	60.8
CDY19568	Canola	peroxisome	60.07	60.51
CDY32418	Canola	peroxisome	19.78	60.11
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	63.31	55.52
CDY06431	Canola	peroxisome	53.6	53.89
CDY68920	Canola	peroxisome	53.6	53.89
CDY48875	Canola	mitochondrion, plastid, vacuole	42.63	53.38
CDX82208	Canola	peroxisome	54.86	53.32
CDY32416	Canola	peroxisome	55.04	53.31
CDY19570	Canola	peroxisome	53.6	53.31
CDY45731	Canola	peroxisome	12.05	43.51
CDY71190	Canola	peroxisome	28.6	42.97
CDY65966	Canola	peroxisome	26.8	42.21
CDY06435	Canola	vacuole	33.63	42.02
CDY46376	Canola	peroxisome	40.29	41.56
CDY39153	Canola	peroxisome	39.93	41.19
CDY39155	Canola	peroxisome	40.11	41.14
CDY46375	Canola	peroxisome	39.75	40.77
CDY45730	Canola	vacuole	31.47	38.13
CDX96636	Canola	golgi, vacuole	26.08	37.86
CDY71478	Canola	vacuole	30.94	37.47
CDY39816	Canola	peroxisome	35.61	36.67
CDY33631	Canola	plastid	36.33	36.53
CDX96638	Canola	peroxisome	34.53	36.43
CDX96633	Canola	plastid	35.97	36.17
CDY31472	Canola	peroxisome	33.27	35.99
CDY29527	Canola	peroxisome	34.17	35.85
CDX78914	Canola	peroxisome, plastid	35.79	34.67
CDY31883	Canola	plastid	33.09	33.89
CDY01369	Canola	plastid	32.91	33.7
CDY33627	Canola	peroxisome	33.63	33.57
CDY01370	Canola	peroxisome, plastid	32.91	33.27
CDX96637	Canola	plastid	32.37	32.55
CDY33628	Canola	plastid	32.01	32.25
CDY31474	Canola	peroxisome	31.83	30.52
CDY33629	Canola	golgi, vacuole	23.02	30.26
CDX99401	Canola	peroxisome	32.55	27.1
CDY03253	Canola	peroxisome	35.79	12.9
CDX78913	Canola	cytosol	0.18	0.56

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	GO:A0A078F300	UniProt:A0A078F300
InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY07442	ProteinID:CDY07442	ProteinID:CDY07442.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00124437001	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF169	SUPFAM:SSF56801	UniParc:UPI0002541403
SEG:seg	:	:	:	:	:

Description

BnaA07g25210DBnaA07g25210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F300]

Coordinates

chrLK031978:+:743978..749043

Molecular Weight (calculated)

60444.9 Da

IEP (calculated)

5.946

GRAVY (calculated)

-0.036

Length

556 amino acids

Sequence
(BLAST)

001: MITATLQEPQ IHQPVDTTTP PTDAPPTPPR IFRSKLPDID IPNHLPLHTY CFQKLSSVSD KPCLIVGSTG KSYTYDETHL ICRRVAAGLH KMGIRKGDVI
101: MILLQNSAEF VFSFMGASMI GAVSTTANPF YTSQEIHKQV KSSGAKLIIT HSHYVDKLRN LDGETRIGED LTVITTEDNP PPENCLPFST LLTDDETTSL
201: DVVDVGGDDA AALPFSSGTT GLPKGVVLTH KSLITSVAQQ VDGDNPNLYL KPNDVVLCVL PLFHIYSLNS VLLNSIRSGA TVLLMHKFEI GALLDLIQRH
301: KVTVAALVPP LVIALAKNPT VNSYDLSSVR LVLSGAAPLG KDLEDSLGRR LPQAVLGQGY GMTEAGPVLS MSLGFAKEPT PSKSGSCGTV VRNAELKVVH
401: LETRLSLGYN QPGEICIRGQ QIMKEYLNDP EATSATIDEE GWLHTGDIGY VDEDDEIFIV DRLKEVPPAE LEALLINHHS IADAAVVPQR DEVAGEVPVA
501: FVVRSNGNVI TEEDIKEYIA KQVVFYKRLH KVFFVPSIPK SPSGKILRKD LKAKLC

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.