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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51056 Canola cytosol 96.7 96.7
CDX69618 Canola cytosol 87.82 87.59
CDY09836 Canola cytosol 87.82 87.59
CDX70528 Canola cytosol 87.82 87.37
CDX78547 Canola cytosol 87.31 87.31
CDX91090 Canola cytosol 87.56 87.12
KRG94730 Soybean cytosol 80.71 81.33
VIT_14s0068g00920.t01 Wine grape cytosol 80.96 81.17
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 64.21 80.83
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 67.26 80.79
KRH42776 Soybean cytosol 52.28 80.78
VIT_14s0068g00930.t01 Wine grape cytosol 80.46 80.66
VIT_05s0136g00260.t01 Wine grape cytosol 79.19 80.21
PGSC0003DMT400076178 Potato cytosol 78.93 79.95
Solyc09g091510.2.1 Tomato cytosol, extracellular 78.93 79.95
KRH42759 Soybean cytosol 78.68 79.9
KRH75544 Soybean cytosol 78.43 79.64
KRH42780 Soybean cytosol 78.43 79.64
KRH42778 Soybean cytosol 78.43 79.64
GSMUA_Achr10P... Banana cytosol 65.48 79.63
KRH37579 Soybean cytosol 78.17 79.38
KRH42757 Soybean cytosol 78.17 79.38
KRH42758 Soybean cytosol 78.17 79.38
KRH42775 Soybean cytosol 78.17 79.38
KRH42783 Soybean cytosol 78.17 79.38
KRH58872 Soybean cytosol 78.17 79.38
KRH71115 Soybean cytosol 78.17 79.38
CDY05666 Canola mitochondrion 84.01 79.19
KRH77699 Soybean endoplasmic reticulum 78.17 79.18
KRH27737 Soybean cytosol 78.17 79.18
PGSC0003DMT400049165 Potato cytosol, mitochondrion 77.92 78.92
Solyc05g053550.2.1 Tomato cytosol, mitochondrion 77.92 78.92
KRH42760 Soybean cytosol 77.67 78.87
TraesCS2D01G027700.1 Wheat cytosol 78.43 78.43
TraesCS2A01G035300.1 Wheat cytosol 77.92 77.92
TraesCS2A01G025700.1 Wheat cytosol, golgi 77.67 77.67
TraesCS2B01G038700.1 Wheat cytosol 77.67 77.67
TraesCS2D01G027900.2 Wheat cytosol 77.67 77.67
CDY07114 Canola cytosol 80.71 77.56
EES09858 Sorghum cytosol 78.93 77.56
Zm00001d052673_P001 Maize cytosol 78.68 77.5
HORVU2Hr1G005220.3 Barley cytosol 77.67 77.47
TraesCS2A01G025500.1 Wheat cytosol 77.41 77.41
TraesCS2A01G025600.1 Wheat cytosol 77.41 77.41
EES09864 Sorghum cytosol 78.43 77.25
TraesCS2D01G034500.1 Wheat cytosol 77.41 77.22
TraesCS2B01G048400.1 Wheat cytosol 77.16 77.16
TraesCS2B01G558400.1 Wheat cytosol 77.92 77.14
EES09865 Sorghum cytosol 78.43 77.06
Zm00001d007403_P001 Maize cytosol 78.43 77.06
TraesCS2A01G527700.2 Wheat cytosol 77.67 76.88
Os11t0530600-01 Rice cytosol, mitochondrion, plasma membrane 77.67 76.88
EES09860 Sorghum cytosol 78.17 76.81
EES09863 Sorghum cytosol 78.17 76.81
EES09859 Sorghum cytosol 78.17 76.81
KXG29016 Sorghum cytosol 78.17 76.81
EES08604 Sorghum cytosol 78.17 76.81
HORVU2Hr1G116390.2 Barley cytosol 77.41 76.63
EES09862 Sorghum cytosol 77.92 76.56
EES14634 Sorghum cytosol 75.63 74.87
TraesCS2B01G038600.1 Wheat cytosol 68.78 74.86
TraesCS2B01G613100.1 Wheat cytosol 75.38 74.44
PGSC0003DMT400076179 Potato cytosol 71.57 74.41
TraesCS5D01G488700.1 Wheat cytosol 73.86 73.67
TraesCS5D01G488600.1 Wheat cytosol 73.86 73.67
TraesCS1B01G040300.1 Wheat cytosol, mitochondrion 73.86 73.67
TraesCS2D01G027800.1 Wheat cytosol 39.34 73.46
TraesCS1B01G041000.1 Wheat cytosol 73.35 73.16
TraesCS1B01G040000.1 Wheat cytosol, mitochondrion 73.35 73.16
TraesCS1B01G040100.1 Wheat cytosol 72.84 72.66
TraesCS1A01G032100.1 Wheat cytosol 72.84 72.66
TraesCS1D01G033600.1 Wheat cytosol 73.35 72.43
TraesCS1B01G040200.1 Wheat cytosol, mitochondrion 73.86 72.39
TraesCS1D01G033800.1 Wheat cytosol 72.84 72.11
TraesCS1A01G032300.1 Wheat cytosol 72.59 71.86
TraesCS1B01G040500.1 Wheat cytosol 72.33 71.43
HORVU1Hr1G004830.1 Barley cytosol 71.83 71.28
HORVU1Hr1G089540.1 Barley mitochondrion 71.57 70.68
HORVU2Hr1G004170.4 Barley plastid 77.16 70.21
GSMUA_Achr10P... Banana mitochondrion 60.66 69.68
Os07t0214900-00 Rice cytosol 68.53 67.0
TraesCS2D01G530600.1 Wheat cytosol, plastid 77.67 64.02
CDX69091 Canola cytosol 40.61 40.82
CDX75466 Canola cytosol 40.36 40.56
CDX72506 Canola cytosol 40.36 40.56
CDY34811 Canola cytosol 40.36 40.56
CDY40656 Canola cytosol 40.36 40.56
CDY58814 Canola cytosol 40.36 40.56
CDX83215 Canola mitochondrion 40.1 40.31
CDY21499 Canola mitochondrion 40.1 40.31
CDY17490 Canola cytosol 39.85 40.05
CDX93339 Canola mitochondrion 38.32 38.42
CDY18415 Canola cytosol, mitochondrion 38.07 38.17
Protein Annotations
KEGG:00941+2.3.1.74Gene3D:3.40.47.10MapMan:9.2.2.1.1.1GO:A0A078EYL5EnsemblPlants:CDY05664ProteinID:CDY05664
ProteinID:CDY05664.1InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_NGO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016740GO:GO:0016746GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00120659001InterPro:IPR016039PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441
PANTHER:PTHR11877PANTHER:PTHR11877:SF43MetaCyc:PWY-5135MetaCyc:PWY-6316MetaCyc:PWY-6787MetaCyc:PWY-7397
InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00154UniParc:UPI0004EBB6EF:
Description
BnaC02g38730D
Coordinates
chrLK031963:-:738984..740252
Molecular Weight (calculated)
43089.5 Da
IEP (calculated)
6.735
GRAVY (calculated)
-0.009
Length
394 amino acids
Sequence
(BLAST)
001: MVMGALSLDE IRKAQRGDGP ASILAIGTAN PPNQVIQAEY PDYYFRITNS EHMTDLKEKF KRMCDKSMIR KRYMHLTEEF LKDNPNICAF MAPSLDVRQD
101: ILVTEVPKLG KEAAVNAIKE WGQPKSKITH LVFCTTSGVD MPGADYQLIK LLGLSPFVKR VMMYHQGCYA GGTVLRLAKD IAENNRGARV LIVCSEITVV
201: TFRGPSETHL DSLVGQSLFG DGAAALIVGS DPDTSAGEKP IFEMVSAAQT ILPDSKGAIE GHLKEVGLTF HLLKTVPGLI SKNIEKCLQE AFKPLGISDW
301: NSLFWIAHPG GPAILDHVEI KLGLKAAKMK ATRHVLSEYG NMSSACVFFI LDEMRRRAVE DGAETTGEGL EWGVLFGFGP GLTVETVVLH SVPL
Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.