Factsheet for HORVU2Hr1G005220.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G110130.3
HORVU3Hr1G056560.2
HORVU5Hr1G112670.1
HORVU6Hr1G047380.1
HORVU6Hr1G048650.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	HORVU2Hr1G110130.3	AT3G51240.1	10536025
AT5G13930.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	21669202
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	21669202
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	10536025
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G056710.2	AT5G63590.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G116390.2	Barley	cytosol	96.96	96.23
HORVU2Hr1G004170.4	Barley	plastid	98.48	89.84
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	68.61	86.58
KRH42776	Soybean	cytosol	54.94	85.1
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	69.87	84.15
VIT_14s0068g00930.t01	Wine grape	cytosol	83.04	83.46
VIT_14s0068g00920.t01	Wine grape	cytosol	82.78	83.21
PGSC0003DMT400076178	Potato	cytosol	81.77	83.03
Solyc09g091510.2.1	Tomato	cytosol, extracellular	81.77	83.03
KRH42759	Soybean	cytosol	81.27	82.73
CDX78547	Canola	cytosol	82.28	82.49
KRH42775	Soybean	cytosol	81.01	82.47
KRH42758	Soybean	cytosol	81.01	82.47
KRH42778	Soybean	cytosol	81.01	82.47
KRH58872	Soybean	cytosol	81.01	82.47
KRH42783	Soybean	cytosol	81.01	82.47
KRH42780	Soybean	cytosol	81.01	82.47
CDX91090	Canola	cytosol	82.53	82.32
CDX69618	Canola	cytosol	82.28	82.28
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	81.01	82.26
VIT_05s0136g00260.t01	Wine grape	cytosol	81.01	82.26
KRH42757	Soybean	cytosol	80.76	82.22
GSMUA_Achr10P...	Banana	cytosol	67.34	82.1
CDX70528	Canola	cytosol	82.28	82.07
CDY09836	Canola	cytosol	82.03	82.03
KRH37579	Soybean	cytosol	80.51	81.96
KRH42760	Soybean	cytosol	80.51	81.96
KRH75544	Soybean	cytosol	80.51	81.96
Bra008792.1-P	Field mustard	cytosol	81.77	81.77
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	80.51	81.75
KRH71115	Soybean	cytosol	80.25	81.7
Bra006224.1-P	Field mustard	cytosol	81.52	81.31
AT5G13930.1	Thale cress	cytosol	81.27	81.27
Bra023441.1-P	Field mustard	cytosol	81.01	81.22
KRG94730	Soybean	cytosol	80.0	80.82
KRH77699	Soybean	endoplasmic reticulum	78.48	79.69
KRH27737	Soybean	cytosol	77.97	79.18
Bra036307.1-P	Field mustard	cytosol	78.23	78.63
HORVU1Hr1G089540.1	Barley	mitochondrion	79.24	78.45
CDY51056	Canola	cytosol	78.23	78.43
HORVU1Hr1G004830.1	Barley	cytosol	78.73	78.34
Bra020688.1-P	Field mustard	cytosol	77.72	77.92
CDY05664	Canola	cytosol	77.47	77.67
PGSC0003DMT400076179	Potato	cytosol	73.67	76.78
CDY07114	Canola	cytosol	77.22	74.39
GSMUA_Achr10P...	Banana	mitochondrion	63.04	72.59
CDY05666	Canola	mitochondrion	69.11	65.31
HORVU3Hr1G006040.1	Barley	cytosol	55.19	54.77
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	52.66	52.53
HORVU4Hr1G003250.1	Barley	cytosol	53.67	50.6
HORVU6Hr1G074060.2	Barley	cytosol	50.13	49.13
HORVU2Hr1G003280.1	Barley	cytosol	49.11	48.87
HORVU7Hr1G009190.1	Barley	cytosol	46.58	47.67
HORVU1Hr1G064330.1	Barley	cytosol	47.34	47.34
HORVU7Hr1G024480.2	Barley	cytosol	46.84	46.95
HORVU2Hr1G002640.1	Barley	cytosol	44.81	44.92
HORVU6Hr1G003020.2	Barley	cytosol	46.33	44.31
HORVU5Hr1G093950.1	Barley	cytosol	43.54	42.68
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	45.32	38.58
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	37.97	32.82
HORVU1Hr1G042510.2	Barley	cytosol	35.95	29.22

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU2Hr1G005220	EnsemblPlants:HORVU2Hr1G005220.3	InterPro:IPR016039	UniProt:M0Z919
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0002966D99	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:-:11395530..11400280

Molecular Weight (calculated)

43267.3 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.102

Length

395 amino acids

Sequence
(BLAST)

001: MAAATMTVEE VRKAQRAEGP ATVLAIGTAT PANCVYQADY PDYYFKVTKS DHMADLKEKF KRMCDKSQIR KRYMHLTEEI LQDNPNMCAY MAPSLDARQD
101: IVVVEVPKLG KAAAQKAIKE WGQPRSRITH LVFCTTSGVD MPGADYQLTK MLGLRPSVKR LMMYQQGCFA GGTVLRLAKD LAENNRGARV LVVCSEITAV
201: TFRGPHESHL DSLVGQALFG DGAAAVIVGA DPDVSVERPL FQLVSASQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIERALEDA FKPLGIDDWN
301: SVFWIAHPGG PAILDMVEAK VNLNKERMRA TRHVLSEYGN MSSACVLFIM DEMRKRSAED GHTTTGEGMD WGVLFGFGPG LTVETVVLHS VPITA

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.