Factsheet for HORVU7Hr1G020920.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G093900.1	Wheat	mitochondrion	76.51	90.1
TraesCS7D01G089300.1	Wheat	mitochondrion	71.77	83.88
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	59.27	80.17
HORVU2Hr1G002640.1	Barley	cytosol	53.66	63.2
HORVU7Hr1G009190.1	Barley	cytosol	51.51	61.92
HORVU7Hr1G024480.2	Barley	cytosol	51.94	61.17
HORVU2Hr1G003280.1	Barley	cytosol	51.94	60.71
HORVU6Hr1G074060.2	Barley	cytosol	48.06	55.34
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	45.91	53.79
HORVU4Hr1G003250.1	Barley	cytosol	46.55	51.55
HORVU6Hr1G003020.2	Barley	cytosol	42.67	47.94
HORVU5Hr1G093950.1	Barley	cytosol	40.3	46.4
HORVU2Hr1G005220.3	Barley	cytosol	38.58	45.32
HORVU3Hr1G006040.1	Barley	cytosol	38.58	44.97
HORVU2Hr1G116390.2	Barley	cytosol	38.15	44.47
HORVU1Hr1G089540.1	Barley	mitochondrion	37.07	43.11
HORVU1Hr1G004830.1	Barley	cytosol	36.42	42.57
HORVU1Hr1G064330.1	Barley	cytosol	35.78	42.03
HORVU2Hr1G004170.4	Barley	plastid	38.36	41.11
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	32.11	32.6
HORVU1Hr1G042510.2	Barley	cytosol	30.82	29.42
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.02	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A287VMF9	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	EnsemblPlantsGene:HORVU7Hr1G020920	EnsemblPlants:HORVU7Hr1G020920.2	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797
PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000B480C61
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:28772231..28775660

Molecular Weight (calculated)

50484.1 Da

IEP (calculated)

7.047

GRAVY (calculated)

0.027

Length

464 amino acids

Sequence
(BLAST)

001: PSLNTGHLLP SLAALDTHNH CSFFFLISFR LHSSDTQIYP PLGRPCIQAG KVRCKCKCKW VSCSIDIMAN TTANAREIRR LQRADGPAAV LAIGTANPQH
101: RFCQDEYPDY YFRATNSEHL ADQQKPILKM ICTLTGIETR FAQNLDKMLS AHPEFIDHAT PSLEQRLAIV AVVAPELLAA AATKAIANWG RPATDITHLV
201: VVTNSGAGAP SIDVPLATLM GLRHNVRRTV LQLNGCFAGS AALRLAKDLA ENNRGARVLV ACVELMSVAG FRGPTQGEDC VNNLIRNAVF GDGAGAVIVG
301: ADTVEPVERP LFEMVSASQT VIPDTLQVVT AEIRTCGLDG NVSTKLPNLV ADNIKQCLLD AFGPLGMEVN WNDLFWAVHP GAMAILDKIE RVLQLEPGKL
401: AASRTVAREY GNMLSTTIIF VLDEQRRRME EEGEWAQWGA MVAFGPGFTM ETMVLQATSN LKKK

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.