Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038648.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 82.49 | 79.55 |
| CDY39860 | Canola | cytosol | 71.72 | 68.93 |
| CDY31361 | Canola | cytosol | 69.7 | 66.77 |
| CDY41521 | Canola | cytosol, mitochondrion | 4.71 | 66.67 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 64.98 | 57.44 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 64.31 | 56.85 |
| CDY69013 | Canola | cytosol | 58.59 | 56.68 |
| CDY39565 | Canola | cytosol | 57.24 | 55.74 |
| CDY48154 | Canola | cytosol | 57.24 | 55.74 |
| CDY41520 | Canola | cytosol | 45.45 | 54.66 |
| CDX81188 | Canola | cytosol | 55.56 | 51.56 |
| CDX97750 | Canola | cytosol | 37.71 | 50.68 |
| CDY31363 | Canola | cytosol | 71.72 | 50.47 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 50.51 | 46.58 |
| KRH53203 | Soybean | cytosol | 52.19 | 46.55 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 50.84 | 45.35 |
| GSMUA_Achr10P... | Banana | cytosol | 47.47 | 45.05 |
| PGSC0003DMT400036565 | Potato | cytosol | 53.2 | 44.89 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 52.86 | 44.6 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 50.17 | 44.48 |
| KRH18787 | Soybean | cytosol | 49.83 | 44.31 |
| GSMUA_Achr10P... | Banana | cytosol | 49.16 | 43.58 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 10.44 | 43.06 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 48.15 | 42.94 |
| KRH16579 | Soybean | cytosol, mitochondrion | 43.1 | 42.38 |
| Os02t0767300-01 | Rice | cytosol | 44.78 | 40.18 |
| EES07584 | Sorghum | cytosol | 43.77 | 39.16 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 43.77 | 38.92 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 41.08 | 38.73 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 41.08 | 38.73 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 43.43 | 38.39 |
| TraesCS6D01G310700.1 | Wheat | plastid | 43.1 | 38.32 |
| TraesCS6A01G331400.1 | Wheat | plastid | 43.1 | 38.32 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 42.42 | 37.5 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 40.07 | 36.73 |
| EES00073 | Sorghum | cytosol | 38.05 | 36.69 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 38.05 | 36.57 |
| CDX99549 | Canola | vacuole | 23.23 | 32.39 |
| CDY41286 | Canola | cytosol | 37.37 | 31.01 |
| HORVU6Hr1G080360.1 | Barley | plastid | 36.36 | 30.86 |
| CDX94133 | Canola | cytosol | 37.04 | 30.73 |
| CDY10816 | Canola | cytosol | 36.36 | 30.17 |
| CDY34450 | Canola | cytosol | 33.33 | 28.95 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 32.66 | 28.36 |
| CDX99548 | Canola | cytosol | 32.32 | 28.32 |
| CDX98776 | Canola | cytosol | 37.37 | 28.24 |
| CDX86858 | Canola | cytosol | 31.99 | 28.02 |
| CDY02966 | Canola | cytosol | 33.67 | 27.47 |
| CDY04960 | Canola | cytosol | 34.34 | 27.42 |
| CDX76068 | Canola | cytosol | 33.67 | 27.32 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 32.66 | 27.25 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 31.99 | 27.07 |
| CDX99550 | Canola | cytosol | 30.98 | 26.98 |
| CDX80966 | Canola | cytosol | 33.67 | 26.88 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 31.99 | 26.69 |
| CDY14476 | Canola | plastid | 31.31 | 26.35 |
| CDY07746 | Canola | plastid | 31.31 | 26.35 |
| CDY11329 | Canola | cytosol | 33.0 | 26.34 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 34.01 | 26.3 |
| CDX90761 | Canola | plastid | 30.98 | 26.29 |
| CDY18399 | Canola | plastid | 31.31 | 26.27 |
| CDX80450 | Canola | mitochondrion | 29.63 | 25.81 |
| CDY68873 | Canola | plastid | 30.64 | 25.78 |
| CDX93319 | Canola | plastid | 30.64 | 25.78 |
| CDY05445 | Canola | plastid | 29.29 | 25.51 |
| CDX88109 | Canola | mitochondrion | 29.29 | 25.51 |
| CDY05412 | Canola | mitochondrion | 29.29 | 25.51 |
| CDY42687 | Canola | peroxisome | 30.64 | 25.42 |
| CDY56988 | Canola | peroxisome | 30.3 | 25.21 |
| CDX75020 | Canola | cytosol | 30.98 | 25.0 |
| CDY01001 | Canola | cytosol | 33.67 | 24.69 |
| CDY08545 | Canola | cytosol | 33.67 | 24.69 |
| CDX74687 | Canola | cytosol | 29.63 | 24.51 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 29.63 | 24.38 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 29.29 | 24.1 |
| CDX90759 | Canola | cytosol | 24.24 | 23.84 |
| CDX90656 | Canola | cytosol | 27.61 | 23.43 |
| CDX73739 | Canola | cytosol | 27.95 | 23.18 |
| CDX77983 | Canola | cytosol | 27.95 | 23.18 |
| CDY29008 | Canola | cytosol | 27.27 | 23.14 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 50.17 | 21.91 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 19.87 | 20.14 |
| CDX72185 | Canola | nucleus | 34.01 | 20.04 |
| CDX76765 | Canola | cytosol | 15.49 | 19.33 |
| CDY27251 | Canola | nucleus | 34.01 | 16.26 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.5.1 | GO:A0A078HUP2 | UniProt:A0A078HUP2 | EnsemblPlants:CDY41522 | ProteinID:CDY41522 |
| ProteinID:CDY41522.1 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0016491 |
| GO:GO:0045431 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00073143001 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF382 | SUPFAM:SSF51197 | UniParc:UPI0004EF1345 | : | : | : |
Description
BnaA06g22750DBnaA06g22750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUP2]
Coordinates
chrLK032499:-:203927..205426
Molecular Weight (calculated)
34423.2 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.507
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVPIVDLSN PNEDLVARAV VKASEEWGIF QVVNHGIPPE LIRRLKEVGT KFFELPETEK EAVAKPEDSV DVEGYRTKYQ KDLEGRNAWI DHLFHRIWPP
101: SRVSYRFWPK LPMDYREVNE DYAKHLKKLS EKIMEWLSEG LGLRREALIE GLGGETVEYL MKINYYPPCP DQDLVIGAPD HTDVNGITFL VANEALGLQA
201: FKDNHWIDVK YTTSGIIVIV GDQFHRMSNG KYMSAKHRAT MDKEKTRISW PVFVESSLDH EFAPLRELIT GEDNAPKFKP YVYKDFKFRK LKKLPLD
101: SRVSYRFWPK LPMDYREVNE DYAKHLKKLS EKIMEWLSEG LGLRREALIE GLGGETVEYL MKINYYPPCP DQDLVIGAPD HTDVNGITFL VANEALGLQA
201: FKDNHWIDVK YTTSGIIVIV GDQFHRMSNG KYMSAKHRAT MDKEKTRISW PVFVESSLDH EFAPLRELIT GEDNAPKFKP YVYKDFKFRK LKKLPLD
001: MEMEKNQHIS SLDIPVIDLS NPDEELVASA VVKASQEWGI FQVVNHGIPT ELILRLLQVG MEFFELPETE KEAVAKPEDS LDIEGYRTKY QKDLEGRNAW
101: VDHLFHRIWP PSRVNHKFWP KNPPEYIEVN EEYASHIKKL SEKIMEWLSE GLGLRHEALK EGLGGETIEY LMKINYYPPC PDPELVVGAP DHTDVNGITL
201: LVANEALGLQ AFKDNQWIDA EYTTSGIIVI IGDQFLRMSN GKYKSVEHRA KMDKEKTRIS WPVFVESSLD QVFGPLPELI TGDENVPKFK PYVYKDYKFR
301: KLKKLLLD
101: VDHLFHRIWP PSRVNHKFWP KNPPEYIEVN EEYASHIKKL SEKIMEWLSE GLGLRHEALK EGLGGETIEY LMKINYYPPC PDPELVVGAP DHTDVNGITL
201: LVANEALGLQ AFKDNQWIDA EYTTSGIIVI IGDQFLRMSN GKYKSVEHRA KMDKEKTRIS WPVFVESSLD QVFGPLPELI TGDENVPKFK PYVYKDYKFR
301: KLKKLLLD
Arabidopsis Description
FLS3Flavonol synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ5]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.