Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038447.1-P | Field mustard | cytosol, nucleus, peroxisome | 98.83 | 98.83 |
| CDY34450 | Canola | cytosol | 96.78 | 96.78 |
| AT4G16330.2 | Thale cress | plastid | 78.36 | 73.63 |
| Solyc10g005120.1.1 | Tomato | cytosol | 60.53 | 61.98 |
| KRG98061 | Soybean | mitochondrion, plastid | 63.16 | 61.54 |
| VIT_03s0017g02350.t01 | Wine grape | cytosol | 63.45 | 61.13 |
| TraesCS7D01G119600.1 | Wheat | plastid | 61.11 | 60.76 |
| TraesCS7B01G020000.1 | Wheat | plastid | 61.4 | 60.69 |
| EER87904 | Sorghum | plastid | 61.11 | 60.58 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 61.11 | 60.4 |
| GSMUA_Achr2P19210_001 | Banana | cytosol | 61.4 | 60.17 |
| HORVU7Hr1G025650.1 | Barley | cytosol | 60.82 | 59.94 |
| Os06t0162500-01 | Rice | cytosol | 61.4 | 59.66 |
| KRH30715 | Soybean | cytosol | 62.57 | 58.31 |
| Zm00001d045233_P002 | Maize | plastid | 61.11 | 53.73 |
| PGSC0003DMT400029386 | Potato | cytosol, nucleus, peroxisome | 49.42 | 45.07 |
| CDY07746 | Canola | plastid | 37.72 | 36.54 |
| CDY02966 | Canola | cytosol | 38.89 | 36.54 |
| CDY18399 | Canola | plastid | 37.43 | 36.16 |
| CDX76068 | Canola | cytosol | 38.6 | 36.07 |
| CDY14476 | Canola | plastid | 37.13 | 35.98 |
| CDX93319 | Canola | plastid | 36.84 | 35.69 |
| CDY68873 | Canola | plastid | 36.84 | 35.69 |
| CDY04960 | Canola | cytosol | 38.6 | 35.48 |
| CDY11329 | Canola | cytosol | 38.3 | 35.22 |
| CDX80450 | Canola | mitochondrion | 34.8 | 34.9 |
| CDX99549 | Canola | vacuole | 21.64 | 34.74 |
| CDX80966 | Canola | cytosol | 37.72 | 34.68 |
| CDY05445 | Canola | plastid | 34.5 | 34.6 |
| CDY05412 | Canola | mitochondrion | 34.5 | 34.6 |
| CDX88109 | Canola | mitochondrion | 34.21 | 34.31 |
| CDY39860 | Canola | cytosol | 30.99 | 34.3 |
| CDX90761 | Canola | plastid | 35.09 | 34.29 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 38.3 | 34.11 |
| CDY31361 | Canola | cytosol | 30.7 | 33.87 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 33.04 | 33.63 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 33.04 | 33.63 |
| CDY41520 | Canola | cytosol | 24.27 | 33.6 |
| CDY48154 | Canola | cytosol | 29.53 | 33.11 |
| CDY69013 | Canola | cytosol | 29.53 | 32.9 |
| CDY39565 | Canola | cytosol | 29.24 | 32.79 |
| CDY41522 | Canola | cytosol | 28.36 | 32.66 |
| CDX90656 | Canola | cytosol | 33.33 | 32.57 |
| CDX86858 | Canola | cytosol | 32.16 | 32.45 |
| CDY01001 | Canola | cytosol | 38.01 | 32.1 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 33.33 | 32.02 |
| CDY29008 | Canola | cytosol | 32.75 | 32.0 |
| CDX81188 | Canola | cytosol | 29.82 | 31.88 |
| CDX99548 | Canola | cytosol | 31.58 | 31.86 |
| CDX73739 | Canola | cytosol | 33.33 | 31.84 |
| CDX74687 | Canola | cytosol | 33.33 | 31.75 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 33.04 | 31.74 |
| CDX97750 | Canola | cytosol | 20.47 | 31.67 |
| CDY08545 | Canola | cytosol | 37.43 | 31.6 |
| CDX77983 | Canola | cytosol | 33.04 | 31.56 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 32.16 | 31.34 |
| CDX99550 | Canola | cytosol | 30.99 | 31.09 |
| CDX94133 | Canola | cytosol | 32.16 | 30.73 |
| CDX75020 | Canola | cytosol | 33.04 | 30.71 |
| CDY56988 | Canola | peroxisome | 31.87 | 30.53 |
| CDY10816 | Canola | cytosol | 31.87 | 30.45 |
| CDY41286 | Canola | cytosol | 31.87 | 30.45 |
| CDY42687 | Canola | peroxisome | 31.58 | 30.17 |
| CDX90759 | Canola | cytosol | 25.44 | 28.81 |
| CDX98776 | Canola | cytosol | 32.16 | 27.99 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 28.07 | 26.59 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 27.78 | 26.32 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 22.51 | 26.28 |
| CDX72185 | Canola | nucleus | 38.6 | 26.19 |
| CDY31363 | Canola | cytosol | 31.29 | 25.36 |
| CDX76765 | Canola | cytosol | 16.08 | 23.11 |
| CDY27251 | Canola | nucleus | 37.43 | 20.61 |
| CDY41521 | Canola | cytosol, mitochondrion | 0.88 | 14.29 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078H4B1 | UniProt:A0A078H4B1 | EnsemblPlants:CDY32234 | ProteinID:CDY32234 |
| ProteinID:CDY32234.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00051673001 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF226 | SUPFAM:SSF51197 | UniParc:UPI0004EF0773 | : |
Description
BnaA01g17500DBnaA01g17500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4B1]
Coordinates
chrLK032290:-:175197..176615
Molecular Weight (calculated)
37676.8 Da
IEP (calculated)
6.450
GRAVY (calculated)
-0.279
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: METASRVEAV TKGGLPVVPS QYIQPPEARP NLHHAGDAAP IPTIDLSNSG SAKESIGEAC RNWGAFHVVN HGVPIHLLDR MKALGLSFFQ DCPLEEKLQY
101: ACDSTSAASE GYGSRMLLGA EGDVVLDWRD YFDHHTFPLS RRDPSHWPLR PPHYRQVVEE YGNEMKKLAQ KLLGIISESL SLPCSSIEEA VGEIYQNITM
201: SYYPPCPQPE LTLGLQSHSD MGAITLLIQD DVGGLQLYKD DQWLTVPPIS HAILVLIADQ TEIITNGVYK SAQHRAVTNA NRARLSVATF HDPSKTARIA
301: PASHLIGQHT KPAYKEVVYG QYVSSWYSKG PVGKRNLDAL LC
101: ACDSTSAASE GYGSRMLLGA EGDVVLDWRD YFDHHTFPLS RRDPSHWPLR PPHYRQVVEE YGNEMKKLAQ KLLGIISESL SLPCSSIEEA VGEIYQNITM
201: SYYPPCPQPE LTLGLQSHSD MGAITLLIQD DVGGLQLYKD DQWLTVPPIS HAILVLIADQ TEIITNGVYK SAQHRAVTNA NRARLSVATF HDPSKTARIA
301: PASHLIGQHT KPAYKEVVYG QYVSSWYSKG PVGKRNLDAL LC
001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JLS2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.