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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41520 Canola cytosol 74.27 92.31
CDY41521 Canola cytosol, mitochondrion 5.86 85.71
AT5G63580.1 Thale cress cytoskeleton, cytosol, peroxisome 57.98 71.2
CDY41522 Canola cytosol 56.68 58.59
CDY21556 Canola cytoskeleton, cytosol, peroxisome 62.54 57.14
CDX69931 Canola cytoskeleton, cytosol, peroxisome 62.22 56.85
CDY48154 Canola cytosol 54.4 54.75
CDY39565 Canola cytosol 54.4 54.75
CDY39860 Canola cytosol 54.72 54.37
CDY31361 Canola cytosol 54.4 53.87
CDX81188 Canola cytosol 54.07 51.88
CDX97750 Canola cytosol 32.9 45.7
VIT_18s0001g03470.t01 Wine grape cytosol 46.91 44.72
GSMUA_Achr3P07030_001 Banana cytosol 48.21 44.44
KRH18787 Soybean cytosol 47.88 44.01
KRH53203 Soybean cytosol 47.23 43.54
PGSC0003DMT400036565 Potato cytosol 49.84 43.47
GSMUA_Achr10P... Banana cytosol 44.3 43.45
Solyc11g013110.1.1 Tomato cytosol, plastid 49.19 42.9
VIT_18s0001g03490.t01 Wine grape cytosol 46.58 42.69
KRH16579 Soybean cytosol, mitochondrion 41.69 42.38
GSMUA_Achr10P... Banana cytosol 45.6 41.79
HORVU6Hr1G056710.2 Barley cytosol, peroxisome 9.77 41.67
GSMUA_Achr8P23330_001 Banana cytosol 43.97 40.54
Os02t0767300-01 Rice cytosol 43.0 39.88
CDY31363 Canola cytosol 54.4 39.57
TraesCS4B01G344800.1 Wheat cytosol 41.37 39.2
TraesCS6A01G331400.1 Wheat plastid 42.02 38.62
TraesCS6D01G310700.1 Wheat plastid 42.02 38.62
TraesCS6B01G362100.1 Wheat cytosol 41.69 38.32
TraesCS4B01G344900.1 Wheat cytosol, plastid 38.44 38.19
TraesCS4D01G339800.1 Wheat cytosol, plastid 41.69 38.1
EES07584 Sorghum cytosol 41.04 37.95
TraesCS5A01G513700.1 Wheat cytosol, plastid 41.04 37.5
EES00073 Sorghum cytosol 37.46 37.34
Zm00001d018181_P001 Maize endoplasmic reticulum, nucleus 37.46 36.51
Zm00001d018184_P001 Maize endoplasmic reticulum 37.46 36.51
CDY14476 Canola plastid 36.16 31.44
CDY07746 Canola plastid 36.16 31.44
CDX94133 Canola cytosol 36.48 31.28
CDY41286 Canola cytosol 36.16 31.01
CDX99549 Canola vacuole 21.5 30.99
CDY02966 Canola cytosol 36.48 30.77
CDY18399 Canola plastid 35.18 30.51
CDY10816 Canola cytosol 35.5 30.45
CDX76068 Canola cytosol 36.16 30.33
CDX93319 Canola plastid 34.85 30.31
CDY68873 Canola plastid 34.85 30.31
CDY32234 Canola cytosol, nucleus, peroxisome 32.9 29.53
CDY34450 Canola cytosol 32.9 29.53
CDX98776 Canola cytosol 37.46 29.26
CDX86858 Canola cytosol 31.92 28.91
HORVU6Hr1G080360.1 Barley plastid 32.9 28.86
CDY04960 Canola cytosol 34.53 28.49
CDX80966 Canola cytosol 34.53 28.49
CDY23457 Canola cytosol, nucleus, peroxisome 32.9 28.37
CDY11329 Canola cytosol 34.2 28.23
CDX99548 Canola cytosol 30.62 27.73
CDY30486 Canola cytosol, nucleus, peroxisome 31.92 27.53
CDY14105 Canola cytosol, nucleus, peroxisome 34.2 27.34
CDY05412 Canola mitochondrion 30.29 27.27
CDY05445 Canola plastid 30.29 27.27
CDX80450 Canola mitochondrion 30.29 27.27
CDX90761 Canola plastid 30.94 27.14
CDY05103 Canola cytosol, nucleus, peroxisome 30.94 27.07
CDX88109 Canola mitochondrion 29.97 26.98
CDX99550 Canola cytosol 29.97 26.98
CDY42687 Canola peroxisome 30.94 26.54
CDX74687 Canola cytosol 30.94 26.46
CDY56988 Canola peroxisome 30.62 26.33
CDX75020 Canola cytosol 31.27 26.09
CDX70044 Canola cytosol, nucleus, peroxisome 30.29 25.76
CDY65238 Canola cytosol, nucleus, peroxisome 29.64 25.21
CDY01001 Canola cytosol 33.22 25.19
CDX90759 Canola cytosol 24.76 25.17
CDX90656 Canola cytosol 28.66 25.14
CDY08545 Canola cytosol 32.9 24.94
CDX77983 Canola cytosol 28.66 24.58
CDX73739 Canola cytosol 28.66 24.58
CDY29008 Canola cytosol 28.01 24.57
VIT_18s0001g03510.t01 Wine grape cytosol 49.51 22.35
CDX72185 Canola nucleus 36.48 22.22
CDX76159 Canola cytoskeleton, cytosol, peroxisome 20.52 21.5
CDX76765 Canola cytosol 14.66 18.91
CDY27251 Canola nucleus 35.5 17.55
Protein Annotations
Gene3D:2.60.120.330MapMan:9.2.2.5.1GO:A0A078JNA5UniProt:A0A078JNA5EnsemblPlants:CDY69013ProteinID:CDY69013
ProteinID:CDY69013.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00082019001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF382SUPFAM:SSF51197UniParc:UPI0004EE5B76::
Description
BnaCnng61390DBnaCnng61390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNA5]
Coordinates
chrLK038450:-:1714..4174
Molecular Weight (calculated)
35331.3 Da
IEP (calculated)
6.121
GRAVY (calculated)
-0.487
Length
307 amino acids
Sequence
(BLAST)
001: MEVKRYQPTS PPSETIPIVD LSNPEEELVS RAVVKASQEW GVFHVVNHGI SMDLIRRLKE VGKQFFELPE TEKKAVAKPD DSQDFEGYTR NLKYTEGEVW
101: ADNLFHRILP QSCINYKYWP RNPPEYREVI EEYTKETKKL SERLLGFLSE GLGLRHEALK EGLGGEKSEY VLRINNFPPN PQPDATLGLP EHTDIVALAL
201: IVTNEVPGLQ VFHEGHWFDV QYVPSSITVT IGDQILRLSN GKYKNVLHRV TVDKEKQRMS WPVFVDANPD VVIRPLPELI TGDNPSMFKS IICKDFKYRR
301: LYKLPVD
Best Arabidopsis Sequence Match ( AT5G63580.2 )
(BLAST)
001: MEVERDQHIS PPSLMAKTIP IIDLSNLDEE LVAHAVVKGS EEWGIFHVVN HGIPMDLIQR LKDVGTQFFE LPETEKKAVA KQDGSKDFEG YTTNLKYVKG
101: EVWTENLFHR IWPPTCINFD YWPKNPPQYR EVIEEYTKET KKLSERILGY LSEGLGLPSE ALIQGLGGES TEYVMRINNY PPDPKPDLTL GVPEHTDIIG
201: ITIIITNEVP GLQIFKDDHW LDVHYIPSSI TVNIGDQIMV C
Arabidopsis Description
FLS2Putative inactive flavonol synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:B2GVM7]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.