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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plastid 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86858 Canola cytosol 97.05 97.05
CDX99550 Canola cytosol 95.87 95.31
Bra037921.1-P Field mustard cytosol 97.35 94.02
CDX99549 Canola vacuole 57.23 91.08
CDY05103 Canola cytosol, nucleus, peroxisome 89.09 86.04
CDX90759 Canola cytosol 74.63 83.77
AT4G10490.1 Thale cress cytosol 82.89 80.75
CDX90761 Canola plastid 71.39 69.14
VIT_02s0025g02960.t01 Wine grape cytosol 65.49 63.79
VIT_02s0025g02970.t01 Wine grape cytosol 64.9 63.22
TraesCS2A01G394900.1 Wheat plastid 56.64 55.01
TraesCS2B01G412900.1 Wheat plastid 56.34 54.73
Zm00001d002564_P001 Maize cytosol, peroxisome, plastid 56.34 54.42
EES12710 Sorghum cytosol, peroxisome, plastid 56.34 54.42
Os04t0581100-01 Rice cytosol, peroxisome, plastid 56.05 53.98
GSMUA_AchrUn_... Banana mitochondrion, plastid 61.06 53.08
HORVU2Hr1G093950.12 Barley peroxisome, plastid 53.98 52.44
TraesCS2D01G392900.1 Wheat plastid 56.93 49.49
CDY05445 Canola plastid 49.56 49.27
CDY05412 Canola mitochondrion 49.26 48.97
CDX88109 Canola mitochondrion 48.97 48.68
CDX80450 Canola mitochondrion 48.67 48.39
CDX90656 Canola cytosol 34.51 33.43
CDY21556 Canola cytoskeleton, cytosol, peroxisome 33.04 33.33
CDX77983 Canola cytosol 35.1 33.24
CDY29008 Canola cytosol 34.22 33.14
CDX69931 Canola cytoskeleton, cytosol, peroxisome 32.74 33.04
CDY07746 Canola plastid 34.22 32.86
CDX73739 Canola cytosol 34.51 32.68
CDY56988 Canola peroxisome 34.22 32.49
CDY18399 Canola plastid 33.92 32.49
CDY41522 Canola cytosol 28.32 32.32
CDY23457 Canola cytosol, nucleus, peroxisome 33.92 32.3
CDY14476 Canola plastid 33.63 32.29
CDY48154 Canola cytosol 28.91 32.13
CDY42687 Canola peroxisome 33.92 32.12
CDX75020 Canola cytosol 34.81 32.07
CDY30486 Canola cytosol, nucleus, peroxisome 33.63 32.02
CDY68873 Canola plastid 33.33 32.01
CDX93319 Canola plastid 33.33 32.01
CDY39565 Canola cytosol 28.61 31.8
CDY34450 Canola cytosol 31.86 31.58
CDY32234 Canola cytosol, nucleus, peroxisome 31.86 31.58
CDX74687 Canola cytosol 32.74 30.92
CDY04960 Canola cytosol 33.92 30.91
CDX76068 Canola cytosol 33.33 30.87
CDY02966 Canola cytosol 33.04 30.77
CDX97750 Canola cytosol 20.06 30.77
CDY69013 Canola cytosol 27.73 30.62
CDX70044 Canola cytosol, nucleus, peroxisome 32.45 30.47
CDY65238 Canola cytosol, nucleus, peroxisome 32.45 30.47
CDY11329 Canola cytosol 33.33 30.38
CDY39860 Canola cytosol 27.43 30.1
CDY41520 Canola cytosol 21.83 29.96
CDX80966 Canola cytosol 32.74 29.84
CDY14105 Canola cytosol, nucleus, peroxisome 33.63 29.69
CDY31361 Canola cytosol 27.14 29.68
CDX76765 Canola cytosol 20.35 28.99
CDY10816 Canola cytosol 29.5 27.93
CDX94133 Canola cytosol 29.5 27.93
CDY41286 Canola cytosol 29.5 27.93
CDX81188 Canola cytosol 25.96 27.5
CDX76159 Canola cytoskeleton, cytosol, peroxisome 23.01 26.62
CDY01001 Canola cytosol 31.27 26.17
CDY08545 Canola cytosol 30.68 25.68
CDX98776 Canola cytosol 29.2 25.19
CDX72185 Canola nucleus 33.92 22.82
CDY31363 Canola cytosol 28.02 22.51
CDY27251 Canola nucleus 33.92 18.52
CDY41521 Canola cytosol, mitochondrion 0.59 9.52
Protein Annotations
MapMan:11.8.3.4Gene3D:2.60.120.330GO:A0A078EJS4EnsemblPlants:CDX99548ProteinID:CDX99548ProteinID:CDX99548.1
InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00107989001InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PRINTS:PR00682PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF251
SUPFAM:SSF51197UniParc:UPI0004EF3AE8::::
Description
BnaC09g24440D
Coordinates
chrLK031911:+:787399..788805
Molecular Weight (calculated)
38131.1 Da
IEP (calculated)
5.609
GRAVY (calculated)
-0.340
Length
339 amino acids
Sequence
(BLAST)
001: MEASATSKLL VSDIASSVDH VPSNYVRPIS DRPNLSKIET SGDSIPMIDL QELHGSNRAD VIYQIKNHGV PEKTIERMMT VAREFFRQPE SERVKHYSAD
101: TKKTTRLSTS FNVGSEKVSN WRDFLRLHCL PIEDFISEWP SSPVSFREVT AEYATSVRAL VLVLLEAISE SLGLAKDSVS NTLGKHGQHM ALNYYPPCPQ
201: PDLTFGLPGH KDPNLITALL QDEVSGLQVF KDGKWIAVHP VPNTFIVNVG DQMQVISNDK YKSVLQRAVV NSDKERISIP TFYCPSLDAV VGPQQELINE
301: EEESHAVYRS FTYAEYYEKF WDRALATESC IDLFKASKT
Best Arabidopsis Sequence Match ( AT4G10490.1 )
(BLAST)
001: MAASKLLVSD IASVVDHVPS NYVRPVSDRP KMSEVQTSGD SIPLIDLHDL HGPNRADIIN QFAHACSSCG FFQIKNHGVP EETIKKMMNA AREFFRQSES
101: ERVKHYSADT KKTTRLSTSF NVSKEKVSNW RDFLRLHCYP IEDFINEWPS TPISFREVTA EYATSVRALV LTLLEAISES LGLAKDRVSN TIGKHGQHMA
201: INYYPRCPQP ELTYGLPGHK DANLITVLLQ DEVSGLQVFK DGKWIAVNPV PNTFIVNLGD QMQVISNEKY KSVLHRAVVN SDMERISIPT FYCPSEDAVI
301: SPAQELINEE EDSPAIYRNF TYAEYFEKFW DTAFDTESCI DSFKASTA
Arabidopsis Description
DLO2Protein DMR6-LIKE OXYGENASE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.