Factsheet for Zm00001d018184_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 22654889

gfp PMID: 22654889 doi

ML Falcone Ferreyra, MI Casas, JI Questa, AL Herrera, S Deblasio, J Wang, D Jackson, E Grotewold, P Casati

Centro de Estudios Fotosintéticos y Bioquímicos, Universidad Nacional de Rosario Rosario, Argentina.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001960_P001
Zm00001d007403_P001
Zm00001d011438_P001
Zm00001d044122_P001
Zm00001d052673_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08640.1	Zm00001d001960_P001	AT3G51240.1	18467451
AT5G08640.1	Zm00001d007403_P001	AT5G13930.1	18467451
AT5G08640.1	Zm00001d052673_P001	AT5G13930.1	18467451
AT5G08640.1	Zm00001d011438_P001	AT5G42800.1	18467451
AT5G08640.1	Zm00001d044122_P001	AT5G42800.1	18467451
AT5G63590.1	Zm00001d007403_P001	AT5G13930.1	18467451
AT5G63590.1	Zm00001d052673_P001	AT5G13930.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018181_P001	Maize	endoplasmic reticulum, nucleus	99.37	99.37
EES07584	Sorghum	cytosol	91.75	87.05
Os02t0767300-01	Rice	cytosol	75.87	72.21
TraesCS6B01G362100.1	Wheat	cytosol	74.6	70.36
TraesCS6D01G310700.1	Wheat	plastid	73.65	69.46
TraesCS6A01G331400.1	Wheat	plastid	72.38	68.26
TraesCS4D01G339800.1	Wheat	cytosol, plastid	65.71	61.61
TraesCS5A01G513700.1	Wheat	cytosol, plastid	65.71	61.61
TraesCS4B01G344800.1	Wheat	cytosol	61.9	60.19
TraesCS4B01G344900.1	Wheat	cytosol, plastid	57.78	58.9
GSMUA_Achr10P...	Banana	cytosol	57.14	53.73
GSMUA_Achr10P...	Banana	cytosol	53.33	53.67
GSMUA_Achr3P07030_001	Banana	cytosol	56.51	53.45
VIT_18s0001g03470.t01	Wine grape	cytosol	53.97	52.8
HORVU6Hr1G080360.1	Barley	plastid	58.41	52.57
KRH16579	Soybean	cytosol, mitochondrion	50.16	52.32
GSMUA_Achr8P23330_001	Banana	cytosol	54.6	51.65
KRH53203	Soybean	cytosol	53.33	50.45
KRH18787	Soybean	cytosol	53.02	50.0
AT5G08640.1	Thale cress	cytosol	52.38	49.11
VIT_18s0001g03490.t01	Wine grape	cytosol	51.43	48.36
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	51.11	47.92
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	51.11	47.92
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	51.11	47.92
Solyc11g013110.1.1	Tomato	cytosol, plastid	52.38	46.88
PGSC0003DMT400036565	Potato	cytosol	52.38	46.88
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	42.86	43.83
HORVU6Hr1G056710.2	Barley	cytosol, peroxisome	9.52	41.67
CDY41522	Canola	cytosol	38.73	41.08
Bra038648.1-P	Field mustard	cytosol	38.73	41.08
Bra018076.1-P	Field mustard	cytosol	39.68	40.98
CDY39565	Canola	cytosol	39.37	40.66
CDY48154	Canola	cytosol	39.05	40.33
Bra037747.1-P	Field mustard	cytosol	39.05	39.17
CDY39860	Canola	cytosol	38.1	38.84
CDX97750	Canola	cytosol	26.98	38.46
CDX81188	Canola	cytosol	38.73	38.12
CDY31361	Canola	cytosol	37.46	38.06
Bra029211.1-P	Field mustard	cytosol	37.14	37.74
AT5G63600.2	Thale cress	cytosol	39.05	37.73
CDY69013	Canola	cytosol	36.51	37.46
Bra038647.1-P	Field mustard	cytosol	36.19	37.13
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	32.38	36.56
AT5G43935.1	Thale cress	cytosol	33.97	36.52
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	26.35	33.2
CDY41520	Canola	cytosol	26.03	33.2
Zm00001d029744_P001	Maize	cytosol	34.29	32.14
Zm00001d014914_P001	Maize	cytosol	39.68	31.65
Zm00001d038073_P001	Maize	cytosol	21.59	31.34
Zm00001d042980_P002	Maize	cytosol	36.83	31.02
Zm00001d028744_P001	Maize	cytosol	35.87	30.05
Zm00001d048800_P001	Maize	cytosol	18.1	29.08
Zm00001d035462_P001	Maize	cytosol	35.24	29.06
Bra029212.1-P	Field mustard	cytosol	38.41	28.67
CDY41521	Canola	cytosol, mitochondrion	1.9	28.57
CDY31363	Canola	cytosol	38.1	28.44
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	33.02	28.18
Zm00001d001960_P001	Maize	plastid	32.7	28.14
Zm00001d047744_P001	Maize	mitochondrion	36.19	28.01
Zm00001d002564_P001	Maize	cytosol, peroxisome, plastid	31.11	27.92
Zm00001d045233_P002	Maize	plastid	33.33	26.99
Zm00001d020163_P001	Maize	cytosol	21.9	25.84
Zm00001d035308_P001	Maize	extracellular	27.94	25.66
Zm00001d001927_P001	Maize	cytosol	26.03	25.08
Zm00001d012456_P004	Maize	plastid	37.46	25.0
VIT_18s0001g03510.t01	Wine grape	cytosol	53.65	24.85
Zm00001d049926_P001	Maize	cytosol	31.75	24.81
Zm00001d051896_P001	Maize	cytosol	26.67	24.0
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.7	23.41
Zm00001d052999_P001	Maize	cytosol	32.38	23.02
Zm00001d041726_P001	Maize	plastid	25.08	22.83
Zm00001d001924_P001	Maize	plastid	25.4	22.1
Zm00001d042655_P001	Maize	cytosol	0.32	0.88

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.5.1	UniProt:A0A1D6HLB6	ProteinID:AQK75215.1	ncoils:Coil	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF165	SUPFAM:SSF51197
UniParc:UPI000844B193	EnsemblPlantsGene:Zm00001d018184	EnsemblPlants:Zm00001d018184_P001	EnsemblPlants:Zm00001d018184_T001	SEG:seg	:

Description

flavonol synthase1 flavonol synthase1

Coordinates

chr5:-:215975576..215976694

Molecular Weight (calculated)

34901.7 Da

IEP (calculated)

6.744

GRAVY (calculated)

-0.396

Length

315 amino acids

Sequence
(BLAST)

001: MGGETHLSVQ ELAASLGALP PEFVRSEQDQ PGATTYRGAA VPDAPVIDIS EPGFGARMAA AAREWGLFQV VNHGVPSAAV AELQRVGRAF FALPTEEKER
101: YAMDPASGKI EGYGTKLQRD LEGKKTWNDF FFHVVAPPEK VDHAVWPRSL AGYREANEEY CRHMQRLTRE LFEHLSLGLG LHGGAMAEAF GGDGLVFLQK
201: INFYPPCPQP ELTLGVAPHT DMSTLTVLVP NEVQGLQVFK DGQWYEANNG AYKAVLHRTT VNKEKTRMSW PMFVEPPGEL VVGPHPKLVT EESPAKYKAK
301: KYKDYQHCKI NKLPM

Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)

001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD

Arabidopsis Description

FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.