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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01135
EES01136
EES04562
EES08604
EES09858
EES09859
EES09860
EES09862
EES09863
EES09864
EES09865
EES13031
EES14634
EES19023
KXG27349
KXG29016

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G08640.1 EES13031 AT3G51240.1 18467451
AT5G08640.1 KXG27349 AT3G51240.1 18467451
AT5G08640.1 EES08604 AT5G13930.1 18467451
AT5G08640.1 EES09858 AT5G13930.1 18467451
AT5G08640.1 EES09859 AT5G13930.1 18467451
AT5G08640.1 EES09860 AT5G13930.1 18467451
AT5G08640.1 EES09862 AT5G13930.1 18467451
AT5G08640.1 EES09863 AT5G13930.1 18467451
AT5G08640.1 EES09864 AT5G13930.1 18467451
AT5G08640.1 EES09865 AT5G13930.1 18467451
AT5G08640.1 EES14634 AT5G13930.1 18467451
AT5G08640.1 KXG29016 AT5G13930.1 18467451
AT5G08640.1 EES01135 AT5G42800.1 18467451
AT5G08640.1 EES01136 AT5G42800.1 18467451
AT5G08640.1 EES04562 AT5G42800.1 18467451
AT5G08640.1 EES19023 AT5G42800.1 18467451
AT5G63590.1 EES08604 AT5G13930.1 18467451
AT5G63590.1 EES09858 AT5G13930.1 18467451
AT5G63590.1 EES09859 AT5G13930.1 18467451
AT5G63590.1 EES09860 AT5G13930.1 18467451
AT5G63590.1 EES09862 AT5G13930.1 18467451
AT5G63590.1 EES09863 AT5G13930.1 18467451
AT5G63590.1 EES09864 AT5G13930.1 18467451
AT5G63590.1 EES09865 AT5G13930.1 18467451
AT5G63590.1 EES14634 AT5G13930.1 18467451
AT5G63590.1 KXG29016 AT5G13930.1 18467451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07584 Sorghum cytosol 63.31 58.73
Os02t0767300-01 Rice cytosol 62.34 58.01
TraesCS6D01G310700.1 Wheat plastid 61.36 56.59
TraesCS6B01G362100.1 Wheat cytosol 60.71 55.99
TraesCS6A01G331400.1 Wheat plastid 60.06 55.39
TraesCS4B01G344900.1 Wheat cytosol, plastid 54.87 54.69
TraesCS5A01G513700.1 Wheat cytosol, plastid 58.12 53.27
TraesCS4D01G339800.1 Wheat cytosol, plastid 58.12 53.27
TraesCS4B01G344800.1 Wheat cytosol 54.87 52.16
GSMUA_Achr10P... Banana cytosol 50.65 49.84
GSMUA_Achr10P... Banana cytosol 52.27 48.06
GSMUA_Achr8P23330_001 Banana cytosol 51.3 47.45
GSMUA_Achr3P07030_001 Banana cytosol 50.0 46.25
AT5G08640.1 Thale cress cytosol 50.32 46.13
VIT_18s0001g03470.t01 Wine grape cytosol 47.4 45.34
Bra009358.1-P Field mustard cytoskeleton, cytosol, peroxisome 49.35 45.24
CDX69931 Canola cytoskeleton, cytosol, peroxisome 49.35 45.24
CDY21556 Canola cytoskeleton, cytosol, peroxisome 49.35 45.24
HORVU6Hr1G056710.2 Barley cytosol, peroxisome 10.39 44.44
KRH18787 Soybean cytosol 46.43 42.81
KRH53203 Soybean cytosol 46.1 42.64
Bra018076.1-P Field mustard cytosol 41.23 41.64
CDY39565 Canola cytosol 41.23 41.64
HORVU6Hr1G080360.1 Barley plastid 47.08 41.43
KRH16579 Soybean cytosol, mitochondrion 40.58 41.39
CDY48154 Canola cytosol 40.91 41.31
VIT_18s0001g03490.t01 Wine grape cytosol 44.81 41.19
AT5G63590.1 Thale cress cytoskeleton, cytosol, peroxisome 40.91 40.91
Solyc11g013110.1.1 Tomato cytosol, plastid 45.45 39.77
PGSC0003DMT400036565 Potato cytosol 45.45 39.77
CDX97750 Canola cytosol 28.25 39.37
AT5G43935.1 Thale cress cytosol 36.36 38.23
CDY41521 Canola cytosol, mitochondrion 2.6 38.1
Bra038648.1-P Field mustard cytosol 36.69 38.05
CDY41522 Canola cytosol 36.69 38.05
CDY39860 Canola cytosol 37.66 37.54
CDY69013 Canola cytosol 37.34 37.46
Bra038647.1-P Field mustard cytosol 37.01 37.13
CDY31361 Canola cytosol 37.34 37.1
Bra029211.1-P Field mustard cytosol 37.01 36.77
Bra037747.1-P Field mustard cytosol 37.01 36.31
AT5G63595.1 Thale cress cytoskeleton, cytosol, peroxisome 32.14 35.48
AT5G63580.1 Thale cress cytoskeleton, cytosol, peroxisome 28.57 35.2
CDX81188 Canola cytosol 36.36 35.0
AT5G63600.2 Thale cress cytosol 36.69 34.66
EER92960 Sorghum cytosol 37.01 33.93
EER94585 Sorghum cytosol 36.69 33.63
CDY41520 Canola cytosol 26.62 33.2
EES12710 Sorghum cytosol, peroxisome, plastid 34.74 30.48
EER95911 Sorghum cytosol 32.14 29.55
EES18946 Sorghum cytosol 35.06 29.51
EES01705 Sorghum cytosol 36.69 29.12
KXG26978 Sorghum cytosol 32.14 28.86
EES04312 Sorghum cytosol 36.69 28.32
Bra029212.1-P Field mustard cytosol 37.99 27.73
CDY31363 Canola cytosol 37.66 27.49
EER92419 Sorghum cytosol 34.09 27.42
EES13031 Sorghum cytosol 32.79 27.01
EER87904 Sorghum plastid 30.19 26.96
KXG23558 Sorghum cytosol 29.87 26.9
OQU82532 Sorghum cytosol 27.27 26.17
EES06032 Sorghum cytosol 29.55 25.93
KXG27374 Sorghum plastid 27.92 25.83
KXG23555 Sorghum cytosol 27.27 24.93
EES16044 Sorghum cytosol 27.27 24.93
EER96378 Sorghum cytosol 31.82 24.87
EES08336 Sorghum cytosol 31.82 24.75
EES16047 Sorghum cytosol 27.27 24.63
EES15170 Sorghum cytosol 31.82 23.79
KXG27349 Sorghum plastid 33.12 23.67
EES15500 Sorghum cytosol 20.13 22.96
OQU80974 Sorghum cytosol, mitochondrion, peroxisome, plastid 27.27 22.05
VIT_18s0001g03510.t01 Wine grape cytosol 46.1 20.88
Protein Annotations
Gene3D:2.60.120.330MapMan:9.2.2.5.1UniProt:C5XL35InterPro:DIOX_NEnsemblPlants:EES00073ProteinID:EES00073
ProteinID:EES00073.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0016491GO:GO:0045431GO:GO:0046872GO:GO:0051555GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226
PRINTS:PR00682PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF165EnsemblPlantsGene:SORBI_3003G021700SUPFAM:SSF51197
UniParc:UPI0001A84349RefSeq:XP_002454953.1::::
Description
hypothetical protein
Coordinates
chr3:+:1859529..1860643
Molecular Weight (calculated)
34844.6 Da
IEP (calculated)
6.910
GRAVY (calculated)
-0.499
Length
308 amino acids
Sequence
(BLAST)
001: MADVYESVLA LSKSGKVPPD FVRLAQDQPG PNNAFRGDSA PPVIDMSRPR PECGALMADA TRERGLFQVV NHGVPAAAVS EELQPVGRAF FSLPRQEKQE
101: EDYLFHYVAP PAVVNHDIWP KNPAGYREAN EEYCRHIQRL TRGLFQHLSL GLGLEKDAMS EAFGGDDQLV LLQNINFYPP CPQPEVTLGV GPHTDLCVVT
201: ILLPNDVEGL QVFKDGRWHD VPHVPEAFNV FMGDQIETLS NGRYKAVMHR SRVHKEKTRM SWPTFVEPPR ELVVGPHQQL VTDDSPAKYK QPRKYKDYKY
301: RKINLLRL
Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.