CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039362.1-P	Field mustard	cytosol	74.74	78.02
CDX73402	Canola	plastid	66.32	25.1
CDY40202	Canola	plastid	66.32	25.0
CDY65002	Canola	plastid	51.58	21.59
CDX73401	Canola	plastid	62.11	19.41
CDX72554	Canola	plastid	47.37	19.23
VIT_13s0067g03820.t01	Wine grape	extracellular	43.16	17.52
KRG92978	Soybean	plastid	41.05	17.11
Solyc05g010310.2.1	Tomato	cytosol	38.95	16.67
EER90629	Sorghum	cytosol	40.0	16.45
Solyc05g010320.2.1	Tomato	cytosol	38.95	16.37
CDY40203	Canola	plastid	47.37	16.36
TraesCS5A01G475600.1	Wheat	golgi, plastid	38.95	16.16
Zm00001d034635_P001	Maize	cytosol, extracellular	38.95	16.02
Zm00001d012972_P001	Maize	cytosol	38.95	16.02
HORVU5Hr1G112670.1	Barley	cytosol	37.89	15.58
TraesCS5B01G488900.1	Wheat	golgi	36.84	15.15
Os03t0819600-01	Rice	cytosol, plasma membrane	36.84	15.02
GSMUA_Achr4P16830_001	Banana	cytosol	36.84	14.83
TraesCS5D01G489000.1	Wheat	cytosol	35.79	14.72
TraesCS7B01G038200.1	Wheat	cytosol	32.63	13.84
CDY47033	Canola	plastid	27.37	13.54
CDX98830	Canola	cytosol	17.89	8.29
CDX70163	Canola	cytosol	17.89	8.29
CDY53696	Canola	plastid	8.42	4.02

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	GO:A0A078K0E0	UniProt:A0A078K0E0
EnsemblPlants:CDY71367	ProteinID:CDY71367	ProteinID:CDY71367.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf
InterPro:Chalcone_isomerase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0016872	EnsemblPlantsGene:GSBRNA2T00014393001	InterPro:IPR016088
InterPro:IPR016089	PFAM:PF02431	PANTHER:PTHR28039	PANTHER:PTHR28039:SF8	MetaCyc:PWY-2002	MetaCyc:PWY-5059
MetaCyc:PWY-6325	MetaCyc:PWY-6787	MetaCyc:PWY-7397	SUPFAM:SSF54626	UniPathway:UPA00154	UniParc:UPI0004EDFC9F

Description

BnaAnng37160DChalcone-flavonone isomerase family protein [Source:UniProtKB/TrEMBL;Acc:A0A078K0E0]

Coordinates

chrLK045547:-:2094..2528

Molecular Weight (calculated)

10278.4 Da

IEP (calculated)

5.209

GRAVY (calculated)

-0.407

Length

95 amino acids

Sequence
(BLAST)

1: MTSLCCELKC LQIAFSKDDS IPKTGKAVIE NKLLAEAVLE SIIGKKGVSP GARLSLAERL SQLMKENKVE KDATKTDNQD EANDVSLGDK LAKEN

Best Arabidopsis Sequence Match ( AT3G55120.1 )
(BLAST)

001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN

Arabidopsis Description

CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.