Factsheet for Bra039362.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71367	Canola	cytosol	78.02	74.74
Bra007142.1-P	Field mustard	plastid	76.92	27.89
Bra007145.1-P	Field mustard	plastid	71.43	21.74
Bra003209.1-P	Field mustard	plastid	51.65	20.7
VIT_13s0067g03820.t01	Wine grape	extracellular	46.15	17.95
Solyc05g010310.2.1	Tomato	cytosol	41.76	17.12
Zm00001d034635_P001	Maize	cytosol, extracellular	42.86	16.88
EER90629	Sorghum	cytosol	42.86	16.88
Solyc05g010320.2.1	Tomato	cytosol	41.76	16.81
Zm00001d012972_P001	Maize	cytosol	41.76	16.45
KRG92978	Soybean	plastid	40.66	16.23
Os03t0819600-01	Rice	cytosol, plasma membrane	40.66	15.88
TraesCS5A01G475600.1	Wheat	golgi, plastid	39.56	15.72
GSMUA_Achr4P16830_001	Banana	cytosol	40.66	15.68
HORVU5Hr1G112670.1	Barley	cytosol	39.56	15.58
TraesCS5D01G489000.1	Wheat	cytosol	39.56	15.58
TraesCS5B01G488900.1	Wheat	golgi	38.46	15.15
TraesCS7B01G038200.1	Wheat	cytosol	32.97	13.39
Bra017728.1-P	Field mustard	plastid	27.47	12.69
Bra009101.1-P	Field mustard	cytosol	19.78	8.78

Protein Annotations

EnsemblPlants:Bra039362.1	EnsemblPlants:Bra039362.1-P	EnsemblPlantsGene:Bra039362	Gene3D:1.10.890.20	Gene3D:3.50.70.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016872	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf
InterPro:IPR016088	InterPro:IPR016089	KEGG:00941+5.5.1.6	PANTHER:PTHR28039	PANTHER:PTHR28039:SF8	PFAM:PF02431
SUPFAM:SSF54626	UniParc:UPI000253E8D2	UniProt:M4FE41	MapMan:35.1	:	:

Description

AT3G55120 (E=4e-021) TT5, A11, CFI | TT5 (TRANSPARENT TESTA 5); chalcone isomerase

Coordinates

chrScaffold000164:+:122990..123489

Molecular Weight (calculated)

9832.8 Da

IEP (calculated)

6.718

GRAVY (calculated)

-0.434

Length

91 amino acids

Sequence
(BLAST)

1: MCVYLLRGIA FSKDDSIPKT GKAAIENKLL AEAVLESIIG KKGVSPGARL SLAERLSQLM KENKVEKDAT KTDNQDEAND VSLGDKLAKE N

Best Arabidopsis Sequence Match ( AT3G55120.1 )
(BLAST)

001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN

Arabidopsis Description

CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.