Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G145800.1 | Wheat | cytosol, golgi | 97.23 | 97.23 |
| TraesCS5D01G145400.1 | Wheat | cytosol, golgi | 96.77 | 96.77 |
| HORVU5Hr1G046480.1 | Barley | cytosol, golgi, mitochondrion, plastid | 95.39 | 79.01 |
| Os11t0116300-01 | Rice | cytosol, plasma membrane | 70.05 | 71.7 |
| Os12t0115700-01 | Rice | cytosol | 69.59 | 71.23 |
| KXG22932 | Sorghum | cytosol | 66.36 | 64.86 |
| Zm00001d044683_P001 | Maize | cytosol, extracellular | 67.28 | 61.09 |
| AT5G05270.1 | Thale cress | cytosol | 57.14 | 59.33 |
| Solyc05g052240.2.1 | Tomato | cytosol | 52.53 | 59.07 |
| CDX70163 | Canola | cytosol | 55.76 | 59.02 |
| Bra009101.1-P | Field mustard | cytosol | 55.76 | 59.02 |
| PGSC0003DMT400030430 | Potato | cytoskeleton, cytosol, peroxisome | 56.22 | 58.1 |
| CDX98830 | Canola | cytosol | 54.84 | 58.05 |
| KRH53728 | Soybean | endoplasmic reticulum, nucleus | 53.92 | 55.98 |
| KRH64204 | Soybean | nucleus | 52.53 | 54.55 |
| VIT_13s0067g02870.t01 | Wine grape | extracellular | 61.29 | 53.85 |
| GSMUA_Achr11P... | Banana | cytosol | 61.75 | 46.69 |
| TraesCS5A01G475600.1 | Wheat | golgi, plastid | 29.95 | 28.38 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G146900.1 | EnsemblPlantsGene:TraesCS5A01G146900 | Gene3D:1.10.890.20 | Gene3D:3.50.70.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016872 | InterPro:Chalcone_isomerase | InterPro:Chalcone_isomerase_3-sand | InterPro:Chalcone_isomerase_bundle_sf | InterPro:Chalcone_isomerase_sf | InterPro:IPR016088 |
| InterPro:IPR016089 | KEGG:00941+5.5.1.6 | PANTHER:PTHR28039 | PANTHER:PTHR28039:SF4 | PFAM:PF02431 | SEG:seg |
| SUPFAM:SSF54626 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:324075612..324076523
Molecular Weight (calculated)
23677.0 Da
IEP (calculated)
4.445
GRAVY (calculated)
-0.077
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEQEKKAA ATVEVEGIPF PREIAGAKAL SLVGHGVTDI EIHFLQIKFN AVGVYLDVDG AMEHLQGWKG KSQLMEDEAF FDALVSAPVE KVLRVVVIKE
101: IKGSQYGVQL ESSVRDRLVA ADKYEDDEEE ALEKVSDFFQ SKYFRPGSVV TFHFPATPTA APEITFVTEG KEEAKVAVEN AAVAEMIQRW YLGGESAVSQ
201: TTVRSIADSF AAMLSSP
101: IKGSQYGVQL ESSVRDRLVA ADKYEDDEEE ALEKVSDFFQ SKYFRPGSVV TFHFPATPTA APEITFVTEG KEEAKVAVEN AAVAEMIQRW YLGGESAVSQ
201: TTVRSIADSF AAMLSSP
001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT
Arabidopsis Description
CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.