Factsheet for GSMUA_Achr11P23630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0116300-01	Rice	cytosol, plasma membrane	51.92	70.28
Os12t0115700-01	Rice	cytosol	51.57	69.81
Solyc05g052240.2.1	Tomato	cytosol	45.3	67.36
VIT_13s0067g02870.t01	Wine grape	extracellular	56.1	65.18
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	46.69	63.81
Bra009101.1-P	Field mustard	cytosol	45.3	63.41
CDX70163	Canola	cytosol	45.3	63.41
TraesCS5D01G145400.1	Wheat	cytosol, golgi	47.74	63.13
AT5G05270.1	Thale cress	cytosol	45.64	62.68
TraesCS5B01G145800.1	Wheat	cytosol, golgi	47.39	62.67
CDX98830	Canola	cytosol	44.6	62.44
TraesCS5A01G146900.1	Wheat	cytosol	46.69	61.75
KXG22932	Sorghum	cytosol	46.34	59.91
KRH53728	Soybean	endoplasmic reticulum, nucleus	43.55	59.81
KRH64204	Soybean	nucleus	43.55	59.81
Zm00001d044683_P001	Maize	cytosol, extracellular	46.69	56.07
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	48.08	52.67
GSMUA_Achr4P16830_001	Banana	cytosol	22.3	27.12

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand
InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009628	GO:GO:0016872	GO:GO:0080167	EnsemblPlantsGene:GSMUA_Achr11G23630_001	EnsemblPlants:GSMUA_Achr11P23630_001	EnsemblPlants:GSMUA_Achr11T23630_001
InterPro:IPR016088	InterPro:IPR016089	UniProt:M0RUU3	PFAM:PF02431	PANTHER:PTHR28039	PANTHER:PTHR28039:SF4
SUPFAM:SSF54626	UniParc:UPI0002959001	SEG:seg	:	:	:

Description

Putative Chalcone--flavonone isomerase [Source:GMGC_GENE;Acc:GSMUA_Achr11G23630_001]

Coordinates

chr11:+:23473258..23474868

Molecular Weight (calculated)

32471.3 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.109

Length

287 amino acids

Sequence
(BLAST)

001: MLKETHASLK SQEINAHYVH GHLETQLTYW VHKPFTQLPP LFLRPVLHPS LLLRHWSPPL LLSPTPLLRV LVLLCSSAMG SETVMVDQVP FAPEITVTKP
101: LSLLGYGVTD IEIHFLQIKY NAIGIYMEKE IIQHLADWKG KKGSELAEDD VFFDAVVSAP VEKYFRIVVI KEIKGSQYGV QLESAVRDRL AAIDKYEEEE
201: EEALEKVTEF FQKKYFKKDS LITFHFPAAS RTAEISFATE GKEEAKVKVE NPNVAEMIQK WYLGGTRSVS PTTVKSLADN LGTMLAQ

Best Arabidopsis Sequence Match ( AT5G05270.2 )
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Arabidopsis Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.