Factsheet for Os11t0116300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0115700-01	Rice	cytosol	95.75	95.75
KXG22932	Sorghum	cytosol	75.0	71.62
TraesCS5A01G146900.1	Wheat	cytosol	71.7	70.05
TraesCS5D01G145400.1	Wheat	cytosol, golgi	71.23	69.59
TraesCS5B01G145800.1	Wheat	cytosol, golgi	71.23	69.59
Zm00001d044683_P001	Maize	cytosol, extracellular	72.17	64.02
Solyc05g052240.2.1	Tomato	cytosol	57.55	63.21
Bra009101.1-P	Field mustard	cytosol	60.38	62.44
CDX70163	Canola	cytosol	60.38	62.44
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	61.32	61.9
AT5G05270.1	Thale cress	cytosol	60.85	61.72
CDX98830	Canola	cytosol	59.43	61.46
KRH64204	Soybean	nucleus	58.49	59.33
KRH53728	Soybean	endoplasmic reticulum, nucleus	58.49	59.33
VIT_13s0067g02870.t01	Wine grape	extracellular	66.51	57.09
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	70.28	56.87
GSMUA_Achr11P...	Banana	cytosol	70.28	51.92
Os03t0819600-01	Rice	cytosol, plasma membrane	30.19	27.47

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	EntrezGene:4349607	ProteinID:ABA91231.2
ProteinID:ABG22338.1	EMBL:AK059463	ProteinID:BAF27432.1	ProteinID:BAT12413.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand
InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009813	GO:GO:0016853	GO:GO:0016872	GO:GO:0045430	GO:GO:0080167
InterPro:IPR016088	InterPro:IPR016089	EnsemblPlantsGene:Os11g0116300	EnsemblPlants:Os11t0116300-01	PFAM:PF02431	PANTHER:PTHR28039
PANTHER:PTHR28039:SF4	UniProt:Q2RBC7	SUPFAM:SSF54626	UniParc:UPI0000D89985	RefSeq:XP_015616444.1	SEG:seg

Description

chalcone isomeraseChalcone isomerase domain containing protein. (Os11t0116300-01)

Coordinates

chr11:-:729514..732755

Molecular Weight (calculated)

23530.1 Da

IEP (calculated)

4.487

GRAVY (calculated)

-0.085

Length

212 amino acids

Sequence
(BLAST)

001: MGTEIATVEV EGIPFPQEIT VSKPLSLLAN GITDIEIHFL QIKYNAIGVY LEKDNVLAHL ESWKGKKAEE LVQDDGFFQA LVSAPVEKLL RIVVIKEIKG
101: SQYGVQLESS VRDRLVSVDK YEEDEEEALE KVTEFFQSKY FKPNSVITFH FPTTPGIAEI SFVTEGKGEA KLTVENKNVA EMIQKWYLGG ESAVSPTTVK
201: SLADQFAALL SA

Best Arabidopsis Sequence Match ( AT5G05270.2 )
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Arabidopsis Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.