Factsheet for GSMUA_Achr9P15020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g06690.t01	Wine grape	cytosol	48.15	50.3
TraesCS5A01G048400.1	Wheat	cytosol	47.01	48.53
TraesCS5D01G058700.2	Wheat	cytosol	49.57	46.15
TraesCS3B01G351600.1	Wheat	cytosol	46.15	45.13
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	46.15	45.13
Solyc01g105650.2.1	Tomato	cytosol	45.58	44.94
HORVU3Hr1G077080.2	Barley	cytosol, peroxisome, plastid	45.87	44.85
HORVU5Hr1G011540.3	Barley	cytosol	48.72	44.65
KRH53489	Soybean	cytosol	44.73	43.37
TraesCS5B01G053400.2	Wheat	cytosol	47.86	42.53
TraesCS3D01G316200.1	Wheat	cytosol	46.15	40.2
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	42.45	39.11
PGSC0003DMT400083728	Potato	cytosol	18.52	38.92
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	37.04	38.58
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	36.75	38.05
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	36.18	37.69
GSMUA_Achr5P12830_001	Banana	cytosol	35.61	36.87
GSMUA_Achr1P00770_001	Banana	cytosol	35.04	36.5
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	34.76	36.2
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	34.47	35.48
GSMUA_Achr11P...	Banana	cytosol	33.05	35.05
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	38.46	34.62
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	34.19	33.99
GSMUA_Achr5P29330_001	Banana	cytosol	32.76	32.39
GSMUA_Achr5P08490_001	Banana	cytosol	32.76	32.21
GSMUA_Achr6P15610_001	Banana	cytosol	32.19	32.1
GSMUA_Achr2P19210_001	Banana	cytosol	31.62	31.81
GSMUA_Achr7P15540_001	Banana	cytosol	31.34	31.07
GSMUA_Achr10P...	Banana	cytosol	31.05	30.97
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	33.33	30.71
GSMUA_Achr9P04430_001	Banana	cytosol	28.49	30.03
GSMUA_Achr8P23330_001	Banana	cytosol	28.49	30.03
GSMUA_Achr6P32920_001	Banana	cytosol	27.92	29.88
GSMUA_Achr9P23620_001	Banana	cytosol	31.91	29.63
GSMUA_Achr3P07030_001	Banana	cytosol	27.92	29.43
GSMUA_Achr10P...	Banana	cytosol	26.21	29.39
GSMUA_Achr10P...	Banana	cytosol	27.92	29.25
GSMUA_Achr2P02770_001	Banana	cytosol	30.48	28.76
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	26.5	28.62
GSMUA_Achr7P16780_001	Banana	cytosol	29.91	28.15
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	28.21	27.5
Zm00001d042655_P001	Maize	cytosol	1.14	3.54

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G15020_001
EnsemblPlants:GSMUA_Achr9P15020_001	EnsemblPlants:GSMUA_Achr9T15020_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0U0G0
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF369
SUPFAM:SSF51197	UniParc:UPI000296DECC	:	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G15020_001]

Coordinates

chr9:+:9859060..9860463

Molecular Weight (calculated)

39220.7 Da

IEP (calculated)

6.146

GRAVY (calculated)

-0.307

Length

351 amino acids

Sequence
(BLAST)

001: MATARFFSLP DSIKQLSDSG ALSSVPTHYA CRDPDAPSDV DPTLEGQIPT IDLSVLTEGD PARRSQMVRQ LGRACEEWGF FVVVNHGVPE TVREAMLAAA
101: QGFFDLEEEE KAEHSGKHVM DPIRYGTSFN SKVDDVGYWR DYFKIVVHPA FHSPAKPLGF REALGQYAAC TRVVGMELLR GMWESLELDD GYMNNALDLD
201: ACFQVCVVNL YPPCPQPELA MGLPPHSDHS LLTLLHQNGV DGLQVKHGSK WVHVKPPPNS FLVNTGDQME IVTNGRYKSV LHRAVINGRS TRMSIATVVA
301: PSLDTVVEPV AQLVSPERPA MYRGVRYREY LEHQQRNKLW EKSALDHLRV Q

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.