Factsheet for GSMUA_Achr7P15540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15610_001	Banana	cytosol	70.06	70.45
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	64.41	63.69
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	64.41	63.69
KRH38051	Soybean	cytosol, peroxisome	34.46	62.89
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	63.56	62.85
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	32.49	62.84
GSMUA_Achr5P29330_001	Banana	cytosol	62.43	62.25
GSMUA_Achr11P...	Banana	cytosol	58.19	62.24
Bra034168.1-P	Field mustard	cytosol	50.56	61.94
EES18946	Sorghum	cytosol	63.84	61.75
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	63.28	61.71
Os05t0127500-01	Rice	cytosol	62.43	60.05
KRH14938	Soybean	cytosol	61.02	59.83
VIT_13s0067g01020.t01	Wine grape	cytosol	60.45	59.61
TraesCS4A01G109200.1	Wheat	cytosol	61.86	59.51
TraesCS4B01G195000.1	Wheat	cytosol	61.86	59.51
KRG97722	Soybean	cytosol	60.45	59.28
PGSC0003DMT400031149	Potato	cytosol	59.04	58.71
TraesCS4D01G195700.1	Wheat	cytosol	61.02	58.7
CDY04960	Canola	cytosol	61.58	58.6
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	61.3	58.49
Os01t0832600-01	Rice	cytosol	60.45	58.47
Zm00001d035462_P001	Maize	cytosol	62.99	58.38
Bra028752.1-P	Field mustard	cytosol	61.02	58.06
Solyc03g096050.2.1	Tomato	cytosol	58.47	57.98
KRH31155	Soybean	cytosol	59.04	57.89
Solyc10g076660.1.1	Tomato	cytosol	59.6	57.81
CDY11329	Canola	cytosol	60.73	57.8
Bra005860.1-P	Field mustard	cytosol	60.73	57.8
Zm00001d028744_P001	Maize	cytosol	61.3	57.71
AT5G05600.1	Thale cress	cytosol	60.45	57.68
GSMUA_Achr5P08490_001	Banana	cytosol	57.91	57.42
GSMUA_Achr10P...	Banana	cytosol	56.78	57.1
CDX80966	Canola	cytosol	59.89	56.99
VIT_08s0105g00380.t01	Wine grape	cytosol	57.63	56.98
KRH73197	Soybean	cytosol	60.73	56.88
PGSC0003DMT400049192	Potato	cytosol	58.76	56.83
EER92419	Sorghum	cytosol	61.3	56.66
Os03t0289800-01	Rice	cytosol	61.86	56.59
CDY14105	Canola	cytosol, nucleus, peroxisome	61.3	56.51
GSMUA_Achr9P04430_001	Banana	cytosol	52.54	55.86
CDY07746	Canola	plastid	55.37	55.52
AT2G38240.1	Thale cress	plastid	55.08	55.24
Bra000045.1-P	Field mustard	plastid	55.08	55.24
KRH00254	Soybean	plastid	54.24	55.17
Zm00001d042980_P002	Maize	cytosol	58.19	55.08
TraesCS3B01G383900.1	Wheat	cytosol	57.91	54.96
TraesCS3A01G351400.2	Wheat	cytosol	58.76	54.88
KRH49391	Soybean	cytosol	59.04	54.71
KRH65721	Soybean	cytosol	57.63	54.69
CDY14476	Canola	plastid	54.52	54.67
CDY02966	Canola	cytosol	55.93	54.4
CDY68873	Canola	plastid	54.24	54.39
CDX93319	Canola	plastid	54.24	54.39
Bra014716.1-P	Field mustard	cytosol	56.21	54.37
CDY18399	Canola	plastid	54.24	54.24
Bra017132.1-P	Field mustard	plastid	54.24	54.24
TraesCS3D01G345600.1	Wheat	cytosol	57.91	54.23
EES01705	Sorghum	cytosol	59.32	54.12
CDX76068	Canola	cytosol	55.93	54.1
AT3G55970.1	Thale cress	cytosol	54.24	52.89
PGSC0003DMT400028828	Potato	cytosol	53.67	52.78
Zm00001d047744_P001	Maize	mitochondrion	60.17	52.33
GSMUA_Achr6P32920_001	Banana	cytosol	48.02	51.83
Solyc10g085190.1.1	Tomato	cytosol	52.82	51.8
Solyc10g076670.1.1	Tomato	cytosol	32.49	51.57
TraesCS4B01G328300.1	Wheat	cytosol	38.7	51.12
CDY08545	Canola	cytosol	58.47	51.11
AT3G11180.2	Thale cress	cytosol	57.91	50.87
Bra034861.1-P	Field mustard	cytosol	58.19	50.86
CDY01001	Canola	cytosol	57.63	50.37
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	58.19	50.37
Zm00001d012456_P004	Maize	plastid	58.47	43.86
GSMUA_Achr2P19210_001	Banana	cytosol	39.55	40.11
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	37.57	39.47
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	37.01	38.87
GSMUA_Achr1P00770_001	Banana	cytosol	36.44	38.28
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	36.44	38.05
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	36.16	37.98
CDX72185	Canola	nucleus	53.67	37.7
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	37.57	37.68
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	36.16	37.54
GSMUA_Achr8P23330_001	Banana	cytosol	35.03	37.24
GSMUA_Achr3P07030_001	Banana	cytosol	34.75	36.94
GSMUA_Achr5P12830_001	Banana	cytosol	35.31	36.87
GSMUA_Achr10P...	Banana	cytosol	31.92	36.1
GSMUA_Achr10P...	Banana	cytosol	33.9	35.82
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	36.16	32.82
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	33.33	32.78
GSMUA_Achr9P23620_001	Banana	cytosol	33.62	31.48
GSMUA_Achr9P15020_001	Banana	cytosol	31.07	31.34
Bra007204.1-P	Field mustard	cytosol	53.95	30.76
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	32.77	30.45
CDY27251	Canola	nucleus	53.39	30.43
GSMUA_Achr2P02770_001	Banana	cytosol	30.79	29.3
GSMUA_Achr7P16780_001	Banana	cytosol	30.51	28.95
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	25.99	28.31

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G15540_001
EnsemblPlants:GSMUA_Achr7P15540_001	EnsemblPlants:GSMUA_Achr7T15540_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0THU1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF92
SUPFAM:SSF51197	UniParc:UPI0002952861	:	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G15540_001]

Coordinates

chr7:-:12418891..12420533

Molecular Weight (calculated)

39663.6 Da

IEP (calculated)

6.581

GRAVY (calculated)

-0.254

Length

354 amino acids

Sequence
(BLAST)

001: MDCLQEWPEP IVPVQSLSEA PTLPDRYVKP PSQRPSVGDA ARSLDIPVVD LAMLPGGGVV EAVSEACRHW GFFQVVNHGV SMELVRRFRE AWRGFFHLPM
101: EEKKRYANSP RTYEGYGSRL GVDEGANLDW GDYYFLHFLP CYLKDHDKWP AVPACLREAT DEYGVEVRKL CRRVMRALSL GLGLDADRLQ KALGGDDDGV
201: CIRVNFYPRC PRPDLALGLS PHSDPGGMTV LLADDHVHGL QVCKDGVWIT VHPLPNAFII NVGDQIQVLS NAEYKSVEHR AIVHAKEERL SVAFFYNPRS
301: DIPIGPVPEL LTVTGRAALY RPMTFDDYRL FIRRKGPRGK SQVESLEAMA IPGT

Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Arabidopsis Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.