Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G351400.2 | Wheat | cytosol | 98.15 | 97.89 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 95.5 | 96.78 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 93.92 | 86.8 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 56.08 | 79.1 |
| Os01t0832600-01 | Rice | cytosol | 76.45 | 78.96 |
| Zm00001d042980_P002 | Maize | cytosol | 74.34 | 75.13 |
| EES01705 | Sorghum | cytosol | 75.66 | 73.71 |
| PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 30.42 | 62.84 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 58.2 | 61.45 |
| KRH38051 | Soybean | cytosol, peroxisome | 31.22 | 60.82 |
| Zm00001d012456_P004 | Maize | plastid | 75.13 | 60.17 |
| Bra034168.1-P | Field mustard | cytosol | 45.77 | 59.86 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 56.08 | 59.05 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 54.76 | 58.81 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 54.23 | 57.91 |
| KRH31155 | Soybean | cytosol | 55.03 | 57.62 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 56.08 | 57.61 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 54.23 | 57.26 |
| Solyc03g096050.2.1 | Tomato | cytosol | 53.97 | 57.14 |
| KRH14938 | Soybean | cytosol | 54.23 | 56.79 |
| KRG97722 | Soybean | cytosol | 54.23 | 56.79 |
| PGSC0003DMT400031149 | Potato | cytosol | 53.44 | 56.74 |
| CDY04960 | Canola | cytosol | 55.29 | 56.18 |
| Bra028752.1-P | Field mustard | cytosol | 55.29 | 56.18 |
| Solyc10g076660.1.1 | Tomato | cytosol | 54.23 | 56.16 |
| AT5G05600.1 | Thale cress | cytosol | 55.03 | 56.06 |
| PGSC0003DMT400049192 | Potato | cytosol | 54.23 | 56.01 |
| Bra005860.1-P | Field mustard | cytosol | 54.5 | 55.38 |
| CDY11329 | Canola | cytosol | 54.5 | 55.38 |
| KRH00254 | Soybean | plastid | 50.79 | 55.17 |
| CDX80966 | Canola | cytosol | 54.23 | 55.11 |
| AT3G55970.1 | Thale cress | cytosol | 52.91 | 55.1 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 55.56 | 54.69 |
| CDY02966 | Canola | cytosol | 52.65 | 54.67 |
| Bra014716.1-P | Field mustard | cytosol | 52.65 | 54.37 |
| KRH73197 | Soybean | cytosol | 54.23 | 54.23 |
| CDX76068 | Canola | cytosol | 52.38 | 54.1 |
| CDY07746 | Canola | plastid | 49.74 | 53.26 |
| Bra000045.1-P | Field mustard | plastid | 49.74 | 53.26 |
| KRH65721 | Soybean | cytosol | 52.38 | 53.08 |
| CDY14476 | Canola | plastid | 49.47 | 52.97 |
| CDX93319 | Canola | plastid | 49.21 | 52.69 |
| CDY68873 | Canola | plastid | 49.21 | 52.69 |
| Bra017132.1-P | Field mustard | plastid | 49.21 | 52.54 |
| CDY18399 | Canola | plastid | 49.21 | 52.54 |
| KRH49391 | Soybean | cytosol | 52.91 | 52.36 |
| AT2G38240.1 | Thale cress | plastid | 48.41 | 51.84 |
| PGSC0003DMT400028828 | Potato | cytosol | 48.94 | 51.39 |
| TraesCS5D01G159800.1 | Wheat | plastid | 49.74 | 51.37 |
| Solyc10g085190.1.1 | Tomato | cytosol | 47.62 | 49.86 |
| AT3G11180.2 | Thale cress | cytosol | 52.91 | 49.63 |
| Solyc10g076670.1.1 | Tomato | cytosol | 28.84 | 48.88 |
| Bra034861.1-P | Field mustard | cytosol | 50.79 | 47.41 |
| CDY08545 | Canola | cytosol | 50.79 | 47.41 |
| CDY01001 | Canola | cytosol | 50.53 | 47.16 |
| TraesCS6D01G310700.1 | Wheat | plastid | 34.92 | 39.52 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 34.13 | 38.39 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 34.13 | 37.94 |
| CDX72185 | Canola | nucleus | 50.26 | 37.7 |
| TraesCS7D01G119600.1 | Wheat | plastid | 33.86 | 37.21 |
| TraesCS4D01G341800.1 | Wheat | cytosol | 32.28 | 36.31 |
| TraesCS7D01G160100.2 | Wheat | plastid | 30.42 | 34.53 |
| TraesCS2D01G392900.1 | Wheat | plastid | 35.45 | 34.36 |
| TraesCS6D01G270600.1 | Wheat | plastid | 30.42 | 33.82 |
| TraesCS6D01G270700.1 | Wheat | cytosol, peroxisome, plastid | 29.89 | 33.24 |
| TraesCS6D01G270500.1 | Wheat | plastid | 29.89 | 32.94 |
| TraesCS6D01G038500.1 | Wheat | plastid | 29.63 | 32.37 |
| TraesCS2D01G487400.1 | Wheat | cytosol, nucleus, peroxisome | 15.87 | 32.09 |
| TraesCS3D01G437500.2 | Wheat | cytosol | 29.37 | 31.9 |
| TraesCS7D01G279500.1 | Wheat | cytosol | 31.75 | 31.41 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 31.22 | 31.22 |
| TraesCS4D01G002800.1 | Wheat | cytosol, plastid | 32.01 | 30.95 |
| TraesCS6D01G038900.1 | Wheat | cytosol | 26.19 | 30.84 |
| Bra007204.1-P | Field mustard | cytosol | 50.53 | 30.76 |
| TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 26.45 | 30.49 |
| CDY27251 | Canola | nucleus | 50.0 | 30.43 |
| TraesCS3D01G405500.1 | Wheat | cytosol | 28.04 | 30.37 |
| TraesCS6D01G035200.1 | Wheat | cytosol | 27.78 | 30.17 |
| TraesCS3D01G411700.1 | Wheat | cytosol | 22.75 | 28.48 |
| TraesCS6D01G004300.1 | Wheat | cytosol | 32.54 | 28.08 |
| TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 25.13 | 27.94 |
| TraesCS5D01G058700.2 | Wheat | cytosol | 27.25 | 27.32 |
| TraesCS3D01G316200.1 | Wheat | cytosol | 26.45 | 24.81 |
| TraesCS6D01G000600.1 | Wheat | mitochondrion | 14.81 | 21.96 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G345600.1 | EnsemblPlantsGene:TraesCS3D01G345600 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF238 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : |
Description
No Description!
Coordinates
chr3D:+:457030997..457033557
Molecular Weight (calculated)
41587.5 Da
IEP (calculated)
5.742
GRAVY (calculated)
-0.288
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MADCMQEWPE PIVRVQAVAE SGLAAIPGCY VKPPRDRPAQ QHLAAAANAL REPSDDSIPV IDLGELLAAG DGRIDGLITE AVAAACRDWG FFQVVNHGVA
101: PELMRAVREA WRGFFRLPIS AKQQYANQPR TYEGYGSRVG VQKGGPLDWG DYYFLHLAPE AAKSPDKYWP TNPAICKEVS EEYGREVTRL CEVLMKVLSA
201: SLGLEEARFQ EAFGGAECGA CLRANYYPRC PQPDLTLGLS AHSDPGVLTV LLADEHVRGL QVRRADGEWV TVQPVRDDAF IVNVGDQIQI LSNSVYKSVE
301: HRVIVNAKEE RISLALFYNP KGDVPIAPAA ELVRPDRPSL YPPMTFDEYR VYIRKNGPRG KAQLEGFKGQ AVPGTGNK
101: PELMRAVREA WRGFFRLPIS AKQQYANQPR TYEGYGSRVG VQKGGPLDWG DYYFLHLAPE AAKSPDKYWP TNPAICKEVS EEYGREVTRL CEVLMKVLSA
201: SLGLEEARFQ EAFGGAECGA CLRANYYPRC PQPDLTLGLS AHSDPGVLTV LLADEHVRGL QVRRADGEWV TVQPVRDDAF IVNVGDQIQI LSNSVYKSVE
301: HRVIVNAKEE RISLALFYNP KGDVPIAPAA ELVRPDRPSL YPPMTFDEYR VYIRKNGPRG KAQLEGFKGQ AVPGTGNK
001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
Arabidopsis Description
Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.