Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G035200.1 | Wheat | cytosol | 71.62 | 60.92 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 51.69 | 60.24 |
| HORVU4Hr1G089480.1 | Barley | cytosol | 64.86 | 54.55 |
| TraesCS6A01G033300.1 | Wheat | plastid | 58.11 | 49.71 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 56.42 | 48.27 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 45.95 | 41.72 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 45.95 | 38.86 |
| TraesCS7A01G159200.1 | Wheat | plastid | 38.18 | 33.93 |
| TraesCS6A01G288300.1 | Wheat | plastid | 34.12 | 29.71 |
| KRH32174 | Soybean | cytosol | 34.12 | 29.62 |
| VIT_07s0005g03150.t01 | Wine grape | cytosol, peroxisome, plastid | 33.78 | 29.33 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 34.8 | 28.85 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 26.69 | 28.62 |
| PGSC0003DMT400054579 | Potato | cytosol | 32.09 | 27.86 |
| KRH18340 | Soybean | cytosol | 31.08 | 27.3 |
| Solyc02g070080.2.1 | Tomato | cytosol | 31.76 | 27.25 |
| KRG93692 | Soybean | cytosol, nucleus, peroxisome | 30.74 | 27.0 |
| PGSC0003DMT400025139 | Potato | cytosol | 30.41 | 26.95 |
| PGSC0003DMT400051681 | Potato | cytosol | 30.41 | 26.71 |
| Solyc06g083910.2.1 | Tomato | cytosol | 30.41 | 26.71 |
| KRH01377 | Soybean | cytosol, plastid | 30.41 | 26.63 |
| Solyc11g010410.1.1 | Tomato | cytosol | 30.07 | 26.49 |
| PGSC0003DMT400030676 | Potato | mitochondrion | 30.41 | 26.39 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 27.36 | 25.88 |
| Solyc09g066310.2.1 | Tomato | cytosol | 28.72 | 25.84 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 27.03 | 25.81 |
| PGSC0003DMT400025150 | Potato | cytosol | 28.38 | 25.53 |
| Solyc07g043420.2.1 | Tomato | cytosol | 29.39 | 25.44 |
| Solyc09g066320.1.1 | Tomato | cytosol, nucleus, peroxisome | 26.35 | 25.32 |
| PGSC0003DMT400025148 | Potato | cytosol | 23.65 | 25.18 |
| Solyc10g018190.1.1 | Tomato | cytosol | 27.36 | 24.77 |
| PGSC0003DMT400041798 | Potato | cytosol | 28.04 | 24.7 |
| Solyc11g010400.1.1 | Tomato | cytosol | 28.04 | 24.7 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 27.7 | 24.12 |
| Solyc10g018170.1.1 | Tomato | cytosol | 17.23 | 23.94 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 27.7 | 23.7 |
| PGSC0003DMT400070444 | Potato | cytosol, peroxisome, plastid | 27.03 | 22.73 |
| Solyc11g072200.1.1 | Tomato | cytosol, peroxisome, plastid | 26.69 | 22.44 |
| TraesCS2A01G394900.1 | Wheat | plastid | 26.35 | 22.35 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 25.34 | 22.06 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 19.93 | 21.38 |
| Solyc06g073580.2.1 | Tomato | cytosol | 25.34 | 21.25 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 27.36 | 21.09 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 26.35 | 21.08 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 24.66 | 20.39 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 24.66 | 19.95 |
| KRH45093 | Soybean | cytosol, mitochondrion, nucleus, peroxisome | 21.96 | 19.88 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 24.66 | 19.84 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.03 | 19.61 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 21.62 | 19.51 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 21.96 | 19.35 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 24.32 | 19.0 |
| TraesCS2A01G493500.1 | Wheat | golgi | 23.65 | 18.57 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 23.99 | 18.07 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 19.59 | 17.79 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 21.28 | 17.55 |
| TraesCS6A01G331400.1 | Wheat | plastid | 18.92 | 16.77 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 23.99 | 16.21 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G030500.1 | EnsemblPlantsGene:TraesCS6A01G030500 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF220 | PFAM:PF03171 | PFscan:PS51471 | SEG:seg |
| SUPFAM:SSF51197 | MapMan:50.1.13 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:15706692..15707582
Molecular Weight (calculated)
32729.8 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.590
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLSNALAH HSVPDRYVFP PDKRPVPLSE RPQPRRRLPR HRPAPRRPPH LRPSPPPGGR GDRQGRQGVQ LLPGGEPRHG GGRGAGAPAE DKLPCCSYDM
101: SKRFRLTSST SYDHGETRYW RDYIKFPCYP ASDENARHWP SKPSNLTPSL VEYSTAVHEL AQTILCLIAE GLGLDGSFFT GDLSGGDTHI SVNYYPPCPD
201: PTVTMGLLAH CDRHLLTVFS QADVQARHGD RWLLVHPIPS AFVVNFGHQM EIVTNGVLAS VEHRSVTNSA VARIGGCRWP HTCTPPMGAA SDRRQK
101: SKRFRLTSST SYDHGETRYW RDYIKFPCYP ASDENARHWP SKPSNLTPSL VEYSTAVHEL AQTILCLIAE GLGLDGSFFT GDLSGGDTHI SVNYYPPCPD
201: PTVTMGLLAH CDRHLLTVFS QADVQARHGD RWLLVHPIPS AFVVNFGHQM EIVTNGVLAS VEHRSVTNSA VARIGGCRWP HTCTPPMGAA SDRRQK
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.