Factsheet for Solyc07g054870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	59.26	91.6
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	59.01	90.53
Solyc07g054930.2.1	Tomato	cytosol, plastid	74.81	81.45
Solyc07g054920.1.1	Tomato	cytoskeleton, cytosol, peroxisome, plastid	69.38	77.62
Solyc07g054940.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	72.1	71.22
Solyc08g006770.2.1	Tomato	plastid	36.3	41.88
Solyc01g105660.2.1	Tomato	cytosol, plastid	35.56	40.34
Solyc01g105650.2.1	Tomato	cytosol	34.32	39.04
Solyc06g073080.2.1	Tomato	plastid	28.15	35.62
Solyc09g008560.2.1	Tomato	cytosol	32.59	34.92
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	28.4	34.12
Solyc10g076660.1.1	Tomato	cytosol	30.12	33.42
Solyc10g018170.1.1	Tomato	cytosol	17.53	33.33
Solyc10g085190.1.1	Tomato	cytosol	29.38	32.96
Solyc10g005120.1.1	Tomato	cytosol	27.16	32.93
Solyc03g096050.2.1	Tomato	cytosol	28.4	32.21
Solyc10g018190.1.1	Tomato	cytosol	25.93	32.11
Solyc11g007890.1.1	Tomato	cytosol	29.63	32.09
Solyc07g043420.2.1	Tomato	cytosol	26.91	31.87
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	23.95	31.49
Solyc06g083910.2.1	Tomato	cytosol	26.17	31.45
Solyc02g070080.2.1	Tomato	cytosol	26.67	31.3
Solyc09g066310.2.1	Tomato	cytosol	25.19	31.0
Solyc11g013110.1.1	Tomato	cytosol, plastid	26.42	30.4
Solyc01g090140.1.1	Tomato	plastid	16.79	30.36
Solyc11g010400.1.1	Tomato	cytosol	24.69	29.76
Solyc11g010410.1.1	Tomato	cytosol	24.44	29.46
Solyc10g076670.1.1	Tomato	cytosol	16.05	29.15
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	24.69	28.41
Solyc02g083860.2.1	Tomato	cytosol	24.44	27.35
Solyc06g073580.2.1	Tomato	cytosol	22.72	26.06
Solyc08g080040.2.1	Tomato	cytosol	24.69	23.92

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4CG29	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc07g054870.2	EnsemblPlants:Solyc07g054870.2.1
UniParc:UPI000276C806	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:63048971..63054879

Molecular Weight (calculated)

45584.0 Da

IEP (calculated)

8.402

GRAVY (calculated)

-0.335

Length

405 amino acids

Sequence
(BLAST)

001: MANLLQLNRW NHRMLMNMYN PNSNNMRQSK IRSKIAYKQT PISSNSPVMV LNNCNIDYKK GVKYLVDNSK NMKMVPLEFV LPIPEGERPS MAIDGSIPVI
101: DMSGLNGPVV QQRLSTIHAI SSACAEWGFF RVTNHGIKES LMDEMVQVVE EFFNLPLEEK MKYGSDDVMD PVRYGTSLTT TRKHALHWRD FLRHYGGLTP
201: HTYHLWPANP PAYRDVAKEY LKEVWQLAVI IFGAISEGLG LDPNYIESSL GDEGTQLVIS NYYPACPEPN KTLGLAPHSD HGGLTIVMDN GIHGLQIKHN
301: QTWYSVPSIP GTFVVNLGDF LEVLSNGKYK SIEHRAIVNT EAARISIAVG HGPKMDAIVQ PASPLIKEKS ESKYRPIIYK DYIRAQQSTI KRGKSALDEI
401: MNNNI

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.